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Author Spotlight: Advancements in Multiplex Detection of Respiratory Viruses
Published on: November 10, 2023
Multiplex Detection of Pleurotus ostreatus Mycoviruses
Xiaoyan Zhang1, Haijing Hu1, Yifan Wang1
1Shandong Key Laboratory of Edible Mushroom Technology, School of Agriculture, Ludong University, Yantai 264025, China.
Abstract:
Mycoviruses are viruses that specifically infect and replicate in fungi. Several mycoviruses have been previously reported in Pleurotus ostreatus, including the oyster mushroom spherical virus (OMSV), oyster mushroom isometric virus (OMIV), Pleurotus ostreatus spherical virus (POSV), and Pleurotus ostreatus virus 1 (PoV1). This study was designed to develop a multiplex RT-PCR for simultaneous detection and differentiation of the four P. ostreatus mycoviruses. Four pairs of primers were designed from conserved regions based on the reported sequences and the multiplex RT-PCR products were 672 bp for OMSV, 540 bp for OMIV, 310 bp for POSV, and 200 bp for PoV1. The optimal annealing temperature of the multiplex RT-PCR was 62 °C and the detection limits of the plasmids were 100 fg for OMSV and OMIV and 1 pg for POSV and PoV1. This technique was successfully applied for the detection of OMSV, OMIV, and POSV from different P. ostreatus strains and the plasmid containing the PoV1 sequence. This methodology can serve as a powerful diagnostic tool for the survey of the incidence and epidemiology of the four P. ostreatus mycoviruses, further contributing to the prevention and treatment of mycoviral diseases in P. ostreatus.
Insights
A new multiplex RT-PCR method enables simultaneous detection of four mycoviruses in oyster mushrooms (Pleurotus ostreatus), aiding in disease management. This diagnostic tool helps survey mycovirus incidence and epidemiology.
Area of Science:
- Mycology
- Virology
- Molecular Biology
Background:
- Mycoviruses infect fungi, with four known types in *Pleurotus ostreatus*: oyster mushroom spherical virus (OMSV), oyster mushroom isometric virus (OMIV), *Pleurotus ostreatus* spherical virus (POSV), and *Pleurotus ostreatus* virus 1 (PoV1).
- Accurate detection of these mycoviruses is crucial for understanding their impact and managing diseases in oyster mushroom cultivation.
Purpose of the Study:
- To develop a multiplex RT-PCR assay for the simultaneous detection and differentiation of four major mycoviruses in *Pleurotus ostreatus*.
- To establish a reliable diagnostic tool for epidemiological studies and disease control in oyster mushroom farming.
Main Methods:
- Design of four primer pairs targeting conserved regions of OMSV, OMIV, POSV, and PoV1 sequences.
- Optimization of multiplex RT-PCR conditions, including an annealing temperature of 62 °C.
- Determination of assay sensitivity, with detection limits of 100 fg for OMSV/OMIV and 1 pg for POSV/PoV1.
Main Results:
- The multiplex RT-PCR successfully amplified specific products for each mycovirus: 672 bp (OMSV), 540 bp (OMIV), 310 bp (POSV), and 200 bp (PoV1).
- The assay demonstrated high sensitivity and was effectively applied to detect OMSV, OMIV, and POSV in various *P. ostreatus* strains.
- The method also successfully detected the PoV1 sequence from a plasmid, confirming its utility.
Conclusions:
- The developed multiplex RT-PCR is a powerful and efficient diagnostic tool for surveying the incidence and epidemiology of four key *P. ostreatus* mycoviruses.
- This methodology will contribute to the prevention and treatment strategies for mycoviral diseases affecting oyster mushrooms.
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