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Updated: Aug 19, 2025

A High-throughput Platform for the Screening of Salmonella spp./Shigella spp.
Published on: November 7, 2018
Recovery of Salmonella bacterial isolates from pooled fecal samples from horses
Jose I Goni1, Kenitra Hendrix2, Janice Kritchevsky1
1Department of Veterinary Clinical Sciences, College of Veterinary Medicine, West Lafayette, Indiana, USA.
Background:
It is important to determine if a horse is shedding Salmonella spp., but a complete culture series can be cost prohibitive.
Objectives:
Determine the optimal pooling technique to maintain high sensitivity of Salmonella spp. culture using spiked samples, and then demonstrate the efficacy of this protocol on clinical submissions.
Hypothesis:
Pooled fecal samples are as sensitive as 5 individual cultures for the detection of Salmonella shedding.
Animals:
A single Salmonella-negative horse from the university herd, and 19 hospitalized horses.
Methods:
Salmonella-free fecal samples were spiked with different amounts of Salmonella spp. (102 , 103 , 104 , and 105 colony forming units [cfu]) and homogenized to evaluate pooled samples. Five individual fecal samples were collected from 19 hospitalized horses. Ten-gram aliquots of each individual sample were combined to make a pooled sample. Both individual and pooled samples were cultured for Salmonella spp. The identity of bacterial isolates was confirmed by matrix-assisted laser desorption-ionization time of flight mass spectrometry.
Results:
A 102 cfu concentration of Salmonella spp. could be recovered from a spiked Salmonella-free fecal sample. Homogenization protocols indicated that the addition of 20 mL of broth to the pooled sample improved recovery, whereas homogenization time did not. Of the 19 horses tested, 5 were positive for Salmonella. In all instances, Salmonella spp. were recovered from the fecal pool as well as individual samples.
Conclusions And Clinical Importance:
Pooling of 5 fecal samples for Salmonella culture is a sensitive and cost-effective diagnostic approach to detect horses that are shedding the organism.

