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Genetic variants found in paediatric oncology patients with severe chemotherapy-induced toxicity: A case series
E C Bernsen1,2, L M Hanff1,2, L M Haveman1
1Princess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Abstract:
Paediatric oncology patients who develop severe chemotherapy-induced toxicity that requires dose reduction, delay or termination of treatment are at risk of decreased treatment efficacy. Previous research has provided evidence that genetic variants in TPMT, NUDT15, UGT1A1 and DPYD are associated with toxicity of anticancer drugs. This led to pharmacogenetic guidelines that are integrated into clinical practice in paediatric oncology. Recently, novel genetic variants have been associated with a higher risk of developing chemotherapy-induced toxicity. In this case series, we selected 21 novel variants and genotyped these in nine patients with excessive chemotherapy-induced toxicity using whole exome sequencing or micro-array data. We observed that six out of nine patients carried at least one variant that, according to recent studies, potentially increased the risk of developing methotrexate- or vincristine-induced toxicity. As patient-derived genetic data are becoming widely accessible in paediatric oncology, these variants could potentially enter clinical practice to mitigate chemotherapy-induced toxicity.
Insights
Novel genetic variants may increase chemotherapy toxicity risk in pediatric cancer patients. Identifying these genetic markers can help personalize treatment and reduce adverse effects, improving treatment efficacy.
Area of Science:
- Pharmacogenomics
- Pediatric Oncology
- Genetics
Background:
- Severe chemotherapy-induced toxicity can decrease treatment efficacy in pediatric oncology.
- Established genetic variants (TPMT, NUDT15, UGT1A1, DPYD) inform current pharmacogenetic guidelines.
- Emerging research links novel genetic variants to increased chemotherapy toxicity risk.
Purpose of the Study:
- To investigate the association between novel genetic variants and severe chemotherapy-induced toxicity in pediatric oncology patients.
- To evaluate the potential clinical utility of these novel variants in managing treatment toxicity.
Main Methods:
- Case series design involving nine pediatric oncology patients with excessive chemotherapy-induced toxicity.
- Genotyping of 21 novel genetic variants using whole exome sequencing or microarray data.
- Analysis of identified variants against recent literature linking them to methotrexate or vincristine toxicity.
Main Results:
- Six out of nine patients (67%) carried at least one novel genetic variant associated with increased toxicity risk.
- Identified variants showed potential links to methotrexate- or vincristine-induced toxicity.
- Demonstrated a potential role for these novel variants in explaining observed toxicities.
Conclusions:
- Novel genetic variants may contribute significantly to chemotherapy-induced toxicity in pediatric cancer patients.
- These findings suggest that incorporating novel variant genotyping into clinical practice could help mitigate toxicity.
- Personalized pharmacogenetic approaches using novel variants may improve treatment outcomes and reduce adverse events in pediatric oncology.
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