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Published on: February 8, 2018
Systematic pan-cancer analysis identifies RALA as a tumor targeting immune therapeutic and prognostic marker
Haoer Jin1,2, Sha Qin1,2, Jiang He3
1Department of Pathology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Introduction:
RALA is a member of the small GTPase Ras superfamily and has been shown to play a role in promoting cell proliferation and migration in most tumors, and increase the resistance of anticancer drugs such as imatinib and cisplatin. Although many literatures have studied the cancer-promoting mechanism of RALA, there is a lack of relevant pan-cancer analysis.
Methods:
This study systematically analyzed the differential expression and mutation of RALA in pan-cancer, including different tissues and cancer cell lines, and studied the prognosis and immune infiltration associated with RALA in various cancers. Next, based on the genes co-expressed with RALA in pan-cancer, we selected 241 genes with high correlation for enrichment analysis. In terms of pan-cancer, we also analyzed the protein-protein interaction pathway of RALA and the application of small molecule drug Guanosine-5'-Diphosphate. We screened hepatocellular cancer (HCC) to further study RALA.
Results:
The results indicated that RALA was highly expressed in most cancers. RALA was significantly correlated with the infiltration of B cells and macrophages, as well as the expression of immune checkpoint molecules such as CD274, CTLA4, HAVCR2 and LAG3, suggesting that RALA can be used as a kind of new pan-cancer immune marker. The main functions of 241 genes are mitosis and protein localization to nucleosome, which are related to cell cycle. For HCC, the results displayed that RALA was positively correlated with common intracellular signaling pathways such as angiogenesis and apoptosis.
Discussion:
In summary, RALA was closely related to the clinical prognosis and immune infiltration of various tumors, and RALA was expected to become a broad-spectrum molecular immune therapeutic target and prognostic marker for pan-cancer.
Insights
RALA protein is highly expressed in most cancers and correlates with immune cell infiltration and checkpoint molecules, suggesting its potential as a pan-cancer immune marker and therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Immunology
Background:
- RALA, a small GTPase, promotes tumor cell proliferation, migration, and drug resistance.
- Existing research on RALA's cancer mechanisms lacks a comprehensive pan-cancer analysis.
Purpose of the Study:
- To conduct a systematic pan-cancer analysis of RALA's expression, mutation, prognosis, and immune infiltration.
- To explore RALA's co-expressed genes, protein-protein interactions, and therapeutic potential, with a focus on hepatocellular cancer (HCC).
Main Methods:
- Differential expression and mutation analysis of RALA across various cancer types and cell lines.
- Prognostic and immune infiltration analysis associated with RALA.
- Enrichment analysis of RALA co-expressed genes and investigation of RALA's role in HCC.
Main Results:
- RALA is highly expressed in most cancers and significantly correlates with B cell and macrophage infiltration.
- RALA expression is linked to immune checkpoint molecules (CD274, CTLA4, HAVCR2, LAG3), positioning it as a potential pan-cancer immune marker.
- Co-expressed genes are involved in mitosis and cell cycle regulation; RALA in HCC correlates with angiogenesis and apoptosis pathways.
Conclusions:
- RALA is closely associated with clinical prognosis and immune infiltration across multiple cancers.
- RALA shows promise as a broad-spectrum molecular immune therapeutic target and prognostic marker for pan-cancer treatment.
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