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DNMT1/PKR double knockdowned HepG2 (HepG2-DP) cells have high hepatic function and differentiation ability.
Rieko Tanaka-Yachi1, Kazuko Aizawa1, Kie Shimizu1,2
1Department of Pharmacology, National Research Institute for Child Health and Development, Okura 2-10-1, Setagaya-Ku, Tokyo, 157-8535, Japan.
Scientific Reports
|December 8, 2022
Summary
A new HepG2 cell subline, HepG2-DP, was created by knocking down DNA methyltransferase 1 (DNMT1) and protein kinase R (PKR). These HepG2-DP cells exhibit enhanced hepatic functions, making them a superior model for drug metabolism studies.
Area of Science:
- Hepatology and Cell Biology
- Pharmacology and Drug Metabolism
Background:
- HepG2 cells are a common human hepatocyte model but have limited drug metabolism functions compared to primary hepatocytes.
- Previous studies showed zebularine upregulated hepatic gene expression in HepG2 cells by inhibiting DNA methyltransferase 1 (DNMT1) and protein kinase R (PKR).
Purpose of the Study:
- To establish and characterize a new HepG2 cell subline (HepG2-DP) with enhanced hepatocyte functions through stable double knockdown of DNMT1 and PKR.
- To evaluate the functional improvements and differentiation potential of HepG2-DP cells for drug metabolism and pharmacokinetic studies.
Main Methods:
- Stable double knockdown of DNMT1 and PKR in HepG2 cells to create the HepG2-DP subline.
- Assessed albumin production, CYP1A2 gene expression, and lipid droplet accumulation.
- Performed comprehensive gene expression analysis of transcription factors and drug-metabolizing enzymes.
- Investigated HepG2-DP cell maturation via differentiation induction.
Main Results:
- HepG2-DP cells showed increased albumin production, CYP1A2 gene expression, and lipid droplet accumulation compared to parental HepG2 cells.
- Upregulation of key hepatic transcription factors (HNF1β, HNF4α, ONECUT1, FOXA family) and nuclear receptors was observed in HepG2-DP cells.
- Differentiation induction further increased the expression of major CYPs and Phase II, III drug-metabolizing enzymes in HepG2-DP cells.
Conclusions:
- The newly established HepG2-DP cell line exhibits significantly enhanced hepatocyte functions, serving as a more effective model than standard HepG2 cells.
- HepG2-DP cells demonstrate potential for further maturation through differentiation induction, expanding their utility in drug metabolism and pharmacokinetic research.

