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Exploring the Characteristics of Monkeypox-Related Genes in Pan-Cancer
Yong Liao1,2, Zhiping Liu3, Weile Ye3
1Center of Scientific Research, Maoming People's Hospital, Maoming 525000, China.
Abstract:
Monkeypox, an infectious virus that is a member of the Poxviridae family, has raised great threats to humans. Compared to the known oncoviruses, the relationship between monkeypox and cancer still remains obscure. Hence, in this study, we analyzed the multi-omics data from the Cancer Genome Atlas (TCGA) database by using genomic and transcriptomic approaches to comprehensively assess the monkeypox-related genes (MRGs) in tumor samples from 33 types of cancers. Based on the results, the expression of MRGs was highly correlated with the immune infiltration and could be further utilized to predict survival in cancer patients. Furthermore, it was shown that tumorigenesis and patient survival were frequently associated with the genomic alterations of MRGs. Moreover, pathway analysis showed that MRGs participated in the regulation of apoptosis, cell cycle, Epithelial to Mesenchymal Transition (EMT), DNA damage, and hormone androgen receptor (AR), as well as RAS/MAPK and RTK signaling pathways. Besides, we also developed the prognostic features and consensus clustering clusters of MRGs in cancers. Lastly, by mining the cancer drug sensitivity genomics database, we further identified a series of candidate drugs that may target MRGs. Collectively, this study revealed genomic alterations and clinical features of MRGs, which may provide new hints to explore the potential molecular mechanisms between viruses and cancers as well as to provide new clinical guidance of cancer patients who also face the threats during the monkeypox epidemic.
Insights
This study identifies monkeypox-related genes (MRGs) and their genomic alterations in 33 cancer types. These MRGs impact cancer development, immune infiltration, and patient survival, offering potential therapeutic targets.
Area of Science:
- Oncology
- Virology
- Genomics
Background:
- Monkeypox virus (Poxviridae family) poses significant human health threats.
- The oncogenic potential of monkeypox virus remains largely unknown.
- Understanding virus-cancer interactions is crucial for public health.
Purpose of the Study:
- To comprehensively analyze monkeypox-related genes (MRGs) in diverse cancer types.
- To investigate the association between MRGs, genomic alterations, and clinical outcomes.
- To identify potential therapeutic strategies targeting MRGs in cancer patients.
Main Methods:
- Utilized multi-omics data from The Cancer Genome Atlas (TCGA) database.
- Employed genomic and transcriptomic analyses to identify and assess MRGs.
- Performed pathway analysis, survival prediction, and drug sensitivity mining.
Main Results:
- Identified MRGs significantly correlated with immune infiltration and patient survival across 33 cancer types.
- Found genomic alterations in MRGs associated with tumorigenesis and survival.
- Pathway analysis revealed MRG involvement in apoptosis, cell cycle, EMT, DNA damage, and key signaling pathways (AR, RAS/MAPK, RTK).
- Developed prognostic features and identified candidate drugs targeting MRGs.
Conclusions:
- Monkeypox-related genes exhibit significant genomic alterations and clinical relevance in cancer.
- MRGs play roles in critical cancer pathways and influence patient prognosis.
- This research provides insights into virus-cancer mechanisms and potential therapeutic avenues for cancer patients during monkeypox outbreaks.
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