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Federated learning and Indigenous genomic data sovereignty
Nima Boscarino1, Reed A Cartwright2,3, Keolu Fox4
1Hugging Face, Brooklyn, New York, NY, USA.
Nature Machine Intelligence
|December 12, 2022
Summary
Indigenous peoples need better representation in genomic data for accurate precision health. Federated learning offers a secure way to share data with community consent, respecting Indigenous data sovereignty.
Area of Science:
- Genomics
- Bioinformatics
- Health Equity
Background:
- Indigenous peoples are significantly under-represented in current genomic datasets.
- This under-representation limits the accuracy and applicability of precision health initiatives for these communities.
- Existing data sharing models can conflict with Indigenous rights to data governance.
Purpose of the Study:
- To highlight the challenges posed by under-representation of Indigenous peoples in genomic data.
- To explore federated learning as a potential solution for secure and consented data sharing.
- To promote equitable advancements in precision health for Indigenous populations.
Main Methods:
- Review of current genomic data sharing practices and their impact on Indigenous communities.
- Analysis of federated learning principles and their applicability to genomic data.
- Examination of ethical considerations for community-consented data use.
Main Results:
- Under-representation in genomic datasets leads to biased machine learning models in precision health.
- Federated learning enables model training on decentralized data without direct data sharing.
- This approach can uphold Indigenous data sovereignty and facilitate collaborative research.
Conclusions:
- Addressing the under-representation of Indigenous peoples in genomic data is crucial for equitable precision health.
- Federated learning presents a promising, privacy-preserving method for Indigenous genomic data sharing.
- Implementing federated learning requires strong community engagement and adherence to Indigenous data governance principles.
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