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Introducing Circulating Vasculature-Related Transcripts as Biomarkers in Coronary Artery Disease
Hoda Y Abdallah1,2, Ahmed Fareed3, Asmaa K K Abdelmaogood4
1Medical Genetics Unit, Department of Histology and Cell Biology, Faculty of Medicine, Suez Canal University, Ismailia, Egypt. hoda_ibrahim1@med.suez.edu.eg.
Insights
Seven vascular-related RNA transcripts show potential as non-invasive biomarkers for coronary artery disease (CAD). Blood transcriptome analysis offers new diagnostic avenues for CAD patients, aiding early detection and intervention.
Area of Science:
- Cardiovascular Research
- Molecular Biology
- Biomarker Discovery
Background:
- Coronary atherosclerosis (CAS) is driven by atherosclerotic plaque formation, a key process in coronary artery disease (CAD).
- Early diagnosis of CAS is crucial to prevent plaque rupture and sudden cardiac events.
- Identifying novel RNA biomarkers reflecting vascular function is a promising strategy for CAD management.
Purpose of the Study:
- To investigate the expression levels of specific vascular-related RNA transcripts in patients with CAD.
- To assess the potential of these RNA transcripts as diagnostic biomarkers for CAD.
- To explore the regulatory network of these transcripts in the context of CAD.
Main Methods:
- A case-control study involving 180 participants (CAD patients and controls).
- Plasma levels of seven vascular-related RNA transcripts (lncRNA ANRIL, miRNA-126-5p, CDK4, CDK6, TGF-β, E-cadherin, and TNF-α) were measured using RT-qPCR.
- Bioinformatics tools and literature were used for transcript selection, and statistical analyses including ROC and correlation were performed.
Main Results:
- All seven circulating vascular-related RNA transcripts showed statistically significant differences between CAD patients and controls.
- Receiver operating characteristic (ROC) analysis revealed significant predictive value for all transcripts, with CDK4 (AUC=0.91) and E-cadherin (AUC=0.90) demonstrating the highest diagnostic accuracy.
- Strong associations were found among most transcripts in CAD patients, and network analysis highlighted relationships between transcripts and miR-126-5p.
Conclusions:
- The seven investigated circulating vascular-related RNA transcripts show promise as non-invasive biomarkers for CAD.
- These biomarkers reflect cellular vascular function, proliferation, and inflammatory processes relevant to CAD.
- Blood transcriptome analysis represents a novel approach for the non-invasive diagnosis of coronary artery disease.
Background:
Atherosclerotic plaque is considered the hallmark of atherosclerotic lesions in coronary atherosclerosis (CAS), the primary pathogenesis in coronary artery disease (CAD), which develops and progresses through a complex interplay between immune cells, vascular cells, and endothelial shear stresses. Early diagnosis of CAS is critical for avoiding plaque rupture and sudden death. Therefore, identifying new CAD biomarkers linked to vessel wall functions, such as RNA molecules with their distinct signature, is a promising development for these patients. With this rationale, the present study investigated the expression level of the vascular-related RNA transcripts (lncRNA ANRIL, miRNA-126-5p, CDK4, CDK6, TGF-β, E-cadherin, and TNF-α) implicated in the cellular vascular function, proliferation, and inflammatory processes.
Methods:
A case-control study design with a total of 180 subjects classified participants into two groups; CAD and control groups. The relative expression levels of the seven transcripts under study-selected using online bioinformatics tools and current literature-were assessed in the plasma of all study participants using RT-qPCR. Their predictive significance testing, scoring of disease prioritization, enrichment analysis, and the miRNA-mRNA regulatory network was investigated.
Results:
The relative expression levels of all seven of the circulating vascular-related transcripts under study were statistically significant between CAD patients and controls. Receiver operating characteristic (ROC) analysis results indicated the statistical significance of all the transcripts under study with CDK4 showing the highest area under the curve (AUC) equivalent to 0.91, followed by E-cadherin (0.90), miRNA-126-5p (0.83), ANRIL (0.82), TNF-α (0.63), TGF-β (0.62), and CDK6 (0.59), in descending order. A strong association was detected between most of the transcripts studied in CAD patients with a significant Spearman's correlation coefficient with a two-tailed significance of p < 0.001. Network analysis revealed a strong relationship between the five circulating vasculature transcripts studied and their target miRNAs and miR-126-5p, but not for ANRIL.
Conclusion:
The seven circulating vascular-related RNA transcripts under study could serve as potential CAD biomarkers, reflecting the cellular vascular function, proliferation, and inflammatory processes in CAD patients. Therefore, blood transcriptome analysis opens new frontiers for the non-invasive diagnosis of CAD.
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