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Structure-Oriented Transformer for retinal diseases grading from OCT images.

Junyong Shen1, Yan Hu1, Xiaoqing Zhang1

  • 1Research Institute of Trustworthy Autonomous Systems and Department of Computer Science and Engineering, Southern University of Science and Technology, Shenzhen, 51805, Guangdong, China.

Computers in Biology and Medicine
|December 22, 2022
PubMed
Summary
This summary is machine-generated.

This study introduces a Structure-Oriented Transformer (SoT) for precise retinal disease grading, improving the analysis of lesion-retina relationships. The SoT framework enhances diagnostic accuracy for conditions like neovascular Age-related Macular Degeneration (nAMD).

Keywords:
Optical Coherence TomographyRetinal diseases gradingSelf-attentionVision transformer

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Area of Science:

  • Ophthalmology and Medical Imaging
  • Artificial Intelligence in Healthcare

Background:

  • Retinal diseases are a primary cause of vision loss, necessitating accurate grading for timely intervention.
  • Current Convolutional Neural Network (CNN) methods struggle with long-range dependencies crucial for understanding lesion-retina relationships.

Purpose of the Study:

  • To propose a novel Structure-Oriented Transformer (SoT) framework for improved retinal disease grading.
  • To enhance the modeling of relationships between local retinal lesions and the overall retinal structure.

Main Methods:

  • Developed a Structure-Oriented Transformer (SoT) incorporating structure guidance for emphasizing global retinal context.
  • Utilized a pre-trained vision transformer for efficient modeling of feature patch relationships via transfer learning.
  • Implemented a Token vote classifier to aggregate information from all output tokens for final grading.

Main Results:

  • The SoT framework demonstrated effectiveness in constructing lesion-retina relationships on clinical datasets.
  • Experiments on a neovascular Age-related Macular Degeneration (nAMD) dataset showed superior performance compared to state-of-the-art methods.
  • Evaluation on a public retinal diseases dataset confirmed the algorithm's classification superiority and generalizability.

Conclusions:

  • The Structure-Oriented Transformer (SoT) significantly improves the ability to relate local lesions to the whole retina for accurate grading.
  • SoT offers a robust and generalizable approach for retinal disease classification, outperforming existing techniques.