Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

15.5K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
15.5K
Comparing Copy Number Variations and SNPs02:26

Comparing Copy Number Variations and SNPs

17.9K
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
17.9K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Estimating sample size in conceptual property norms by standardizing coverage.

Behavior research methods·2026
Same author

You cannot just count: A statistical rethinking of semantic richness in free-generation tasks and semantic norms.

Psychological methods·2026
Same author

An Agent-Based Model of Semantic Memory Search: Disentangling Cognitive Control and Semantic Space Organization.

Cognitive science·2025
Same author

Towards scalable and reliable coding of semantic property norms: ChatGPT vs. an improved AC-PLT.

Behavior research methods·2025
Same author

NAILS: Normalized Artificial Intelligence Labeling Sensor for Self-Care Health.

Sensors (Basel, Switzerland)·2025
Same author

Physics-Based Signal Analysis of Genome Sequences: An Overview of GenomeBits.

Microorganisms·2023

Related Experiment Video

Updated: Aug 16, 2025

An Integrated Approach for Microprotein Identification and Sequence Analysis
09:37

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

3.5K

GenomeBits Characterization of MPXV.

Enrique Canessa1

  • 1International Centre for Theoretical Physics-ICTP, 34151 Trieste, Italy.

Genes
|December 23, 2022
PubMed
Summary

This study used GenomeBits signal mapping to analyze monkeypox virus (MPXV) genome sequences, revealing evolutionary patterns through statistical analysis. This method aids in the surveillance of emerging infectious diseases like MPXV.

Area of Science:

  • Genomics
  • Virology
  • Bioinformatics

Background:

  • Monkeypox virus (MPXV) genome sequences are increasingly reported globally.
  • Understanding MPXV evolution is crucial for outbreak surveillance.

Purpose of the Study:

  • To characterize the evolution of MPXV using a novel GenomeBits signal mapping approach.
  • To evaluate the utility of statistical analysis of nucleotide sequences for viral characterization.

Main Methods:

  • Genome sequence data from MPXV outbreaks.
  • Letter-to-numerical sequence conversion using GenomeBits signal mapping.
  • Statistical analysis including histograms, cumulative distribution curves, and scatter plots.

Main Results:

Keywords:
GenomeBitsMPXV surveillancegenome sequencemonkeypox virus

More Related Videos

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing
07:24

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing

Published on: February 10, 2023

1.6K
A Robust Polymerase Chain Reaction-based Assay for Quantifying Cytosine-guanine-guanine Trinucleotide Repeats in Fragile X Mental Retardation-1 Gene
08:22

A Robust Polymerase Chain Reaction-based Assay for Quantifying Cytosine-guanine-guanine Trinucleotide Repeats in Fragile X Mental Retardation-1 Gene

Published on: September 16, 2019

8.0K

Related Experiment Videos

Last Updated: Aug 16, 2025

An Integrated Approach for Microprotein Identification and Sequence Analysis
09:37

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

3.5K
Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing
07:24

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing

Published on: February 10, 2023

1.6K
A Robust Polymerase Chain Reaction-based Assay for Quantifying Cytosine-guanine-guanine Trinucleotide Repeats in Fragile X Mental Retardation-1 Gene
08:22

A Robust Polymerase Chain Reaction-based Assay for Quantifying Cytosine-guanine-guanine Trinucleotide Repeats in Fragile X Mental Retardation-1 Gene

Published on: September 16, 2019

8.0K
  • Identification of evolutionary patterns in MPXV genomes through statistical analysis of nucleotide sequences.
  • Demonstration of GenomeBits signal mapping as a viable method for genomic characterization.
  • Conclusions:

    • GenomeBits signal mapping provides a simple yet effective method for analyzing viral evolution.
    • This approach can enhance the surveillance of emerging infectious diseases, including MPXV.