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Updated: Aug 16, 2025

Selecting Multiple Biomarker Subsets with Similarly Effective Binary Classification Performances
Published on: October 11, 2018
Optimal predictive probability designs for randomized biomarker-guided oncology trials.
Emily C Zabor1, Alexander M Kaizer2, Nathan A Pennell3
1Lerner Research Institute & Taussig Cancer Institute, Department of Quantitative Health Sciences, Cleveland Clinic, Cleveland, OH, United States.
Randomized clinical trial designs can improve the efficiency of biomarker-guided oncology studies. These new methods allow for smaller, more informative early-phase trials, optimizing patient enrollment and data collection for targeted cancer therapies.
Area of Science:
- Oncology
- Clinical Trial Design
- Biostatistics
Background:
- Biomarker-targeted cancer therapies are advancing rapidly, with many receiving accelerated approval based on single-arm phase II trials.
- However, the absence of randomization in these trials limits the assessment of comparative efficacy against standard chemotherapies, especially for specific biomarker subpopulations.
- Historical control data often lacks the specificity needed for accurate comparisons, highlighting a need for robust trial designs.
Purpose of the Study:
- To propose and evaluate novel randomized designs for early-phase biomarker-guided oncology clinical trials.
- To enhance the efficiency of these trials by incorporating futility monitoring for multiple biomarker subpopulations.
- To provide a framework for more informative early-phase studies that can better inform later-stage development.
Main Methods:
- Three distinct randomized designs were proposed for biomarker-guided early-phase oncology trials.
- The optimal efficiency predictive probability method was employed for futility monitoring across biomarker subpopulations.
- Candidate designs were selected based on stringent statistical criteria (Type I error between 0.05-0.1, power ≥ 0.8).
- A simulation study, using data from a real-world atezolizumab trial in urothelial carcinoma, evaluated the operating characteristics of the proposed designs.
Main Results:
- The proposed enrichment design demonstrated the smallest average sample sizes (101.0 under null, 218.0 under alternative).
- The stratified control arm design required average sample sizes of 144.8 (null) and 213.8 (alternative).
- The pooled control arm design enrolled an average of 113.2 (null) and 159.6 (alternative) patients.
- These designs achieved average sample size reductions of 23-48% under the alternative and 47-64% under the null compared to a similar real-world trial.
Conclusions:
- Randomized designs incorporating futility stopping can significantly enhance the efficiency of early-phase biomarker-guided oncology trials.
- These innovative designs allow for the efficient collection of more comprehensive data on both treatment and control arms.
- The findings suggest that smaller phase II trials are feasible, providing valuable information to guide subsequent phase III studies.
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