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Published on: July 27, 2018
Molecular characterization of a novel non-segmented double-stranded RNA mycovirus isolated from Penicillium citrinum
Yipeng Huang1,2, Ping Wang3, Hao Wu3
1Department of Microbiology and Immunology, Wannan Medical College, Wuhu, 241002, China.
Abstract:
Penicillium citrinum is a commonly occurring filamentous fungus with a worldwide distribution. However, no sequence data for viruses in P. citrinum have been reported. Here, we characterized a novel dsRNA virus from the hospital indoor air fungal strain P. citrinum RCEF 7060, which we have named "Penicillium citrinum non-segmented dsRNA virus 1" (PcNRV1). The genome of PcNRV1 dsRNA is 2,895 bp in length and contains two open reading frames encoding a protein with an unknown function in ORF1 and a putative RNA-dependent RNA polymerase (RdRp) in ORF2. Sequence comparisons and phylogenetic analysis showed that PcNRV formed a well-supported independent clade together with members of the proposed genus "Unirnavirus" and was most closely related to Penicillium miczynskii RNA virus 1 (PmRV1), with 76.45% amino acid sequence identity in the RdRp. Thus, PcNRV1 is a novel non-segmented dsRNA mycovirus belonging to the proposed genus "Unirnavirus" and is the first characterized viral sequence from P. citrinum.
Insights
Researchers discovered a new virus, Penicillium citrinum non-segmented dsRNA virus 1 (PcNRV1), in the fungus Penicillium citrinum. This finding provides the first viral sequence data for this common fungus.
Area of Science:
- Mycology
- Virology
- Molecular Biology
Background:
- Penicillium citrinum is a widespread filamentous fungus.
- No viral sequences have been previously reported for Penicillium citrinum.
- Fungal viruses (mycoviruses) play roles in fungal ecology and evolution.
Purpose of the Study:
- To characterize a novel dsRNA virus from Penicillium citrinum.
- To determine the genomic features and phylogenetic relationships of the new virus.
- To establish the first viral sequence data for Penicillium citrinum.
Main Methods:
- Isolation and characterization of a dsRNA virus from Penicillium citrinum RCEF 7060.
- Genome sequencing and analysis of the dsRNA virus.
- Bioinformatic analysis including open reading frame identification, sequence comparison, and phylogenetic analysis.
Main Results:
- A novel non-segmented dsRNA virus, named Penicillium citrinum non-segmented dsRNA virus 1 (PcNRV1), was identified.
- The PcNRV1 genome is 2,895 bp and contains two open reading frames (ORFs) encoding an unknown protein and a putative RNA-dependent RNA polymerase (RdRp).
- Phylogenetic analysis placed PcNRV1 within a distinct clade, closely related to the proposed genus "Unirnavirus" and Penicillium miczynskii RNA virus 1 (PmRV1).
Conclusions:
- PcNRV1 represents a novel mycovirus belonging to the proposed "Unirnavirus" genus.
- This is the first reported viral sequence from the fungus Penicillium citrinum.
- The discovery expands the known diversity of mycoviruses and provides a foundation for future research on PcNRV1.
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