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Published on: April 2, 2012
Characterization of monkey adenoviruses with three fiber genes
Iva I Podgorski1, Balázs Harrach1, Mária Benkő1
1Veterinary Medical Research Institute, H-1143 Budapest, Hungary.
Abstract:
Although the occurrence of three fiber genes in monkey adenoviruses had already been described, the relatedness of the "extra" fibers have not yet been discussed. Here we report the genome analysis of two simian adenovirus (SAdV) serotypes from Old World monkeys and the phylogenetic analysis of the multiple fiber genes found in these and related AdVs. One of the newly sequenced serotypes (SAdV-2), isolated from a rhesus macaque (Macaca mulatta), was classified into species Human mastadenovirus G (HAdV-G), while the other serotype (SAdV-17), originating from a grivet (Chlorocebus aethiops), classified to Simian mastadenovirus F (SAdV-F). We identified unique features in the gene content of these SAdVs compared to those typical for other members of the genus Mastadenovirus. Namely, in the E1B region of SAdV-2, the 19K gene was replaced by an ITR repetition and a copy of the E4 ORF1 gene. Among the 37 genes in both SAdVs, three genes of different lengths, predicted to code for the cellular attachment proteins (the fibers), were found. These proteins exhibit high diversity. Yet, phylogenetic calculations of their conserved parts could reveal the probable evolutionary steps leading to the multiple-fibered contemporary HAdV and SAdV species. Seemingly, there existed (a) common ancestor(s) with two fiber genes for the lineages of the AdVs in species SAdV-B, -E, -F and HAdV-F, alongside a double-fibered ancestor for today's SAdV-C and HAdV-G, which later diverged into descendants forming today's species. Additionally, some HAdV-G members picked up a third fiber gene either to the left-hand or to the in-between position from the existing two. A SAdV-F progenitor also obtained a third copy to the middle, as observed in SAdV-17. The existence of three fiber genes in these contemporary AdVs brings novel possibilities for the design of optimised AdV-based vectors with potential multiple target binding abilities.
Insights
This study analyzes simian adenoviruses (SAdVs), revealing unique gene content and multiple fiber genes. Phylogenetic analysis uncovers evolutionary steps leading to contemporary multi-fibered adenoviruses, offering new possibilities for vector design.
Area of Science:
- Virology
- Genomics
- Evolutionary Biology
Background:
- Adenoviruses possess fiber genes crucial for cellular attachment.
- Previous studies identified three fiber genes in some monkey adenoviruses, but their evolutionary relationships remained unclear.
Purpose of the Study:
- To perform genome analysis of two simian adenovirus (SAdV) serotypes.
- To conduct phylogenetic analysis of multiple fiber genes in SAdVs and related adenoviruses (AdVs).
- To elucidate the evolutionary history of multiple fiber genes in human and simian adenoviruses.
Main Methods:
- Genome sequencing and analysis of two novel SAdV serotypes (SAdV-2 and SAdV-17).
- Phylogenetic analysis of conserved regions of multiple fiber genes.
- Comparative genomic analysis of gene content in SAdVs and other Mastadenovirus species.
Main Results:
- SAdV-2 (from rhesus macaque) classified into Human mastadenovirus G (HAdV-G) species; SAdV-17 (from grivet) classified into Simian mastadenovirus F (SAdV-F) species.
- Unique gene content identified in SAdVs, including gene replacements in the E1B region of SAdV-2.
- Phylogenetic analysis suggests common ancestors with two fiber genes for several AdV lineages, with subsequent acquisition of a third fiber gene in some SAdV-F and HAdV-G members.
Conclusions:
- The study clarifies the evolutionary pathways leading to multi-fibered adenoviruses.
- The presence of three fiber genes in contemporary SAdVs and HAdVs presents opportunities for designing advanced AdV-based vectors.
- These findings contribute to understanding adenovirus evolution and potential applications in gene therapy and vaccine development.
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