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Updated: Aug 15, 2025

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Experimental Design for Laser Microdissection RNA-Seq: Lessons from an Analysis of Maize Leaf Development
Published on: March 5, 2017
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Study on ZmRPN10 Regulating Leaf Angle in Maize by RNA-Seq
Xiangzhuo Ji1,2,3, Bingbing Jin1,2,3, Zelong Zhuang1,2,3
1College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China.
International Journal of Molecular Sciences
|January 8, 2023
Summary
The ubiquitin/proteasome-mediated proteolysis pathway
Area of Science:
- Plant molecular biology
- Plant genetics
- Biochemistry
Background:
- Ubiquitin/proteasome-mediated proteolysis (UPP) is vital for plant growth and development.
- Proteasome subunit RPN10 is key for recognizing ubiquitinated substrates in UPP.
- Species-specific differences exist in UPP substrate recognition pathways, necessitating investigation into homologous genes like maize RPN10 (ZmRPN10).
Purpose of the Study:
- To investigate the role of ZmRPN10 in maize leaf angle regulation.
- To explore the interaction between ZmRPN10 and brassinosteroids (BRs) in controlling leaf development.
- To identify genes regulated by ZmRPN10 under BR treatment.
Main Methods:
- Comparative analysis of leaf angle and gene expression in maize wild-type (B73) and rpn10 mutant under exogenous BRs.
- Transcriptome analysis to identify differentially expressed genes.
Main Results:
- Brassinosteroid (BR) regulation of leaf angle was significantly stronger in the rpn10 mutant compared to wild-type maize.
- Transcriptome analysis revealed significant upregulation of CRE1, A-ARR, and SnRK2, and downregulation of PP2C, BRI1 AUX/IAA, JAZ, and MYC2 in the mutant.
- ZmRPN10 plays a regulatory role in maize leaf angle development.
Conclusions:
- ZmRPN10 influences maize leaf angle, potentially through pathways involving BR signaling.
- The study identifies key genes regulated by ZmRPN10, offering insights into its molecular mechanism.
- ZmRPN10 represents a potential genetic resource for improving maize breeding, particularly for leaf architecture.
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