Related Experiment Video
Updated: Aug 14, 2025

07:43
Assaying Proteasomal Degradation in a Cell-free System in Plants
Published on: March 26, 2014
14.6K
From seeds to trees: how E2 enzymes grow ubiquitin chains
Adam J Middleton1, Catherine L Day1
1Department of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin 9054, New Zealand.
Biochemical Society Transactions
|January 16, 2023
Summary
Ubiquitin modification of proteins is crucial for cell functions and disease. This review details how E2 enzymes specifically generate complex ubiquitin chains, impacting cellular processes and disease states.
Area of Science:
- Biochemistry and Molecular Biology
- Cellular Biology
- Biomedical Research
Background:
- Protein ubiquitination is a critical post-translational modification regulating diverse eukaryotic cellular processes, including signal transduction and cell cycle control.
- Dysregulation of ubiquitin transfer is implicated in major human diseases such as cancer and neurodegenerative disorders.
- The ubiquitin system generates a complex code through various modifications and polyubiquitin chain linkages on substrate proteins.
Approach:
- This mini-review focuses on the molecular mechanisms governing E2 enzyme function in ubiquitin chain initiation and elongation.
- It highlights recent biochemical advancements elucidating the specificity of degradative E2 enzymes (Ube2s, Ube2k, and Ube2r) in generating complex ubiquitin chains.
- The discussion emphasizes the role of E2 enzymes in determining the precise nature of the ubiquitin code.
Key Points:
- E2 enzymes are central to the ubiquitin machinery, dictating the type and linkage of ubiquitin modifications.
- Specific degradative E2 enzymes, including Ube2s, Ube2k, and Ube2r, exhibit exquisite control over polyubiquitin chain formation.
- Understanding E2 enzyme mechanisms is key to deciphering the ubiquitin code and its role in health and disease.
Conclusions:
- E2 enzymes play a pivotal role in generating the diverse ubiquitin code, essential for cellular regulation.
- Detailed knowledge of E2 enzyme activity provides insights into disease pathogenesis and potential therapeutic targets.
- Further research into E2 enzyme specificity will advance our understanding of ubiquitination in eukaryotes.
Related Concept Videos
The Proteasome
953
Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
953
Regulated Protein Degradation
7.5K
It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
7.5K
The Proteasome Structure
841
The ubiquitin-proteasome pathway is a well-known mechanism utilized by eukaryotic cells to remove cytoplasmic proteins that are misfolded, damaged, or no longer needed. In this pathway, the protein that needs to be eliminated undergoes a process called ubiquitination, where a chain of ubiquitin molecules is attached to the 48th lysine residue of the target protein. This ubiquitin modification helps the proteasome distinguish between a target protein and a healthy protein.
The proteasome is an...
The proteasome is an...
841
Role of Microtubules in Cell Wall Deposition
2.5K
Microtubules are small hollow tubes in eukaryotic cells. The cell wall microtubules are polymerized dimers of two globular proteins, α-tubulin and β-tubulin, two globular proteins. With a diameter of about 25 nm, microtubules are the widest components of the cytoskeleton. They help the cell resist compression and provide a track along which vesicles move through the cell or pull replicated chromosomes to opposite ends of a dividing cell. Microtubules go through quick cycles of...
2.5K
Anaphase Promoting Complex
2.9K
The stepwise destruction of specific proteins is necessary for the progression and completion of the cell cycle. Such proteins are ubiquitinated by ubiquitin ligases and then subsequently destroyed by the proteasome. The SCF (Skp1/Cullin/F-box) and the anaphase-promoting complex (APC) are two important ubiquitin ligases involved in cell cycle progression. While SCF is active throughout the cell cycle, APC gets activated during metaphase to anaphase transition. Cdc20 or Cdh1 binds to APC and...
2.9K
The Unfolded Protein Response
4.9K
The ER is the hub of protein synthesis in a cell. It has robust systems to quality control protein folding and also for degradation of terminally misfolded proteins. Under normal conditions, a small proportion of misfolded proteins that cannot be salvaged need to be transported to the cytoplasm by the ER-associated degradation or ERAD pathways. However, if the ERAD cannot handle the misfolded proteins, the cell activates the unfolded protein response or UPR to adjust the protein folding...
4.9K

