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An End-to-End Natural Language Processing Application for Prediction of Medical Case Coding Complexity: Algorithm

He Ayu Xu1, Bernard Maccari2, Hervé Guillain3

  • 1Biomedical Data Science Center, Lausanne University Hospital, Lausanne, Switzerland.

JMIR Medical Informatics
|January 19, 2023
PubMed
Summary

This study introduces a machine learning model to predict medical coding complexity, improving efficiency and accuracy. The approach shows performance comparable to human experts in distributing coding tasks.

Keywords:
EHRNLPalgorithmclinical decision support applicationcodingcomplexity predictiondecision supportdevelopmentdocumentationelectronic health recordhealth recordmachine learningmedical codingmodelmultimodal modelingnatural language processingprediction

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Area of Science:

  • Medical Informatics
  • Artificial Intelligence in Healthcare

Background:

  • Medical coding converts clinical documentation to standard codes for reimbursement and analysis.
  • Current AI solutions for medical coding have limited effectiveness, especially for complex cases.
  • Optimizing medical coding is crucial for hospital operations.

Purpose of the Study:

  • To enhance medical coding efficiency and accuracy by improving code selection.
  • To develop a multimodal machine learning solution to predict coding complexity before the coding process.
  • To utilize coding complexity to optimize work distribution among medical coders, minimizing errors and improving throughput.

Main Methods:

  • Collected 2060 cases rated for coding complexity (1-4) by human coders.
  • Used 2 expert coders to establish a gold standard for 3.01% of cases.
  • Extracted and concatenated text and metadata features from electronic health records for machine learning models.
  • Trained and evaluated two models: one for predictive power and generalizability, and another against the human expert benchmark.

Main Results:

  • The first model achieved a macro-F1-score of 0.51 and 0.59 accuracy for 4-scale complexity classification.
  • The model effectively distinguished between simple (1-2) and complex (3-4) cases with a macro-F1-score of 0.65 and 0.71 accuracy.
  • The second model achieved 61% agreement with expert ratings on the gold standard, with a macro-F1-score of 0.62, compared to 66% agreement between experts.

Conclusions:

  • A multimodal machine learning approach effectively predicts coding complexity using clinical text and patient metadata.
  • Integrating this model into hospital systems allows automatic case distribution with performance comparable to human experts.
  • The proposed solution has the potential to significantly improve coding efficiency and accuracy at scale.