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MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
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In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
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The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
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In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
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Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
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Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
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G-quadruplex from precursor miR-1587 modulated its maturation and function.

Fangyuan Li1, Dan Guo1, Ting Xie1

  • 1Medical Research Central, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences, China; Clinical Biobank, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences, China.

International Journal of Biological Macromolecules
|January 19, 2023
PubMed
Summary
This summary is machine-generated.

G-quadruplex structures in precursor microRNAs (miRNAs) regulate their maturation and function. Modulating these G-quadruplex structures alters miRNA expression and target gene activity, impacting miRNA biosynthesis.

Keywords:
G-quadruplexMaturationPrecursor miRNA 1587

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Area of Science:

  • Molecular Biology
  • Genetics
  • Biochemistry

Background:

  • Precursor microRNAs (miRNAs) with G-quadruplex forming sequences can influence Dicer-mediated cleavage.
  • G-quadruplex structures are implicated in regulating miRNA production and function.

Purpose of the Study:

  • To investigate the role of G-quadruplex formation in human precursor miR-1587 maturation and function.
  • To explore how modulating G-quadruplex structures affects miRNA expression and target gene regulation.

Main Methods:

  • Transfection of human precursor miR-1587 with varying solution conditions (e.g., K+, TMPyP4).
  • Confirmation of G-quadruplex formation using Circular Dichroism (CD) and UV melting.
  • Quantification of miR-1587 expression via Q-RT-PCR.
  • Assessment of target gene inhibition (TAGLN, NCOR1) using Q-RT-PCR and Western blot.
  • Elucidation of molecular mechanisms using dual-luciferase assays.

Main Results:

  • G-quadruplex formation in precursor miR-1587 inhibited its maturation, leading to reduced miR-1587 expression.
  • Destabilization of G-quadruplex structures increased miR-1587 expression.
  • Modulation of G-quadruplex structures altered miR-1587's inhibitory effect on target genes (TAGLN, NCOR1).
  • The observed changes in miRNA expression and function were attributed to G-quadruplex structure transformation.

Conclusions:

  • G-quadruplex structures play a critical role in miRNA biosynthesis and function.
  • Modulating the molecular conformation of G-rich precursor miRNAs can alter their function.
  • This study provides a novel approach to control miRNA activity by targeting G-quadruplex structures.