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Updated: Aug 13, 2025

Rare Event Detection Using Error-corrected DNA and RNA Sequencing
Published on: August 3, 2018
How large the number of redundant copies should be to make a rare event probable
F Paquin-Lefebvre1, S Toste1, D Holcman1,2
1Group of Data Modeling, Computational Biology and Applied Mathematics, Ecole Normale Supérieure-PSL, 75005 Paris, France.
Abstract:
The redundancy principle provides a framework to study how rare events are made possible with probability 1 in accelerated time, by making many copies of similar random searchers. However, what is a large n? To estimate large n with respect to the geometrical properties of a domain and the dynamics, we present here a criterion based on splitting probabilities between a small fraction of the exploration space associated with an activation process and other absorbing regions where trajectories can be terminated. We obtain explicit computations especially when there is a killing region located inside the domain that we compare with stochastic simulations. We also present examples of extreme trajectories with killing in dimension 2. For a large n, the optimal trajectories avoid penetrating inside the killing region. Finally, we discuss some applications to cell biology.
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