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Published on: February 23, 2024
Modeling Light-Induced Chromophore Hydration in the Reversibly Photoswitchable Fluorescent Protein Dreiklang
Bella L Grigorenko1,2, Igor V Polyakov1,2, Alexander V Nemukhin1,2
1Department of Chemistry, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.
Computational study reveals how light triggers chromophore hydration in the fluorescent protein Dreiklang, causing it to switch from fluorescent ON to dark OFF states. This mechanism involves chemical modification of the chromophore.
Area of Science:
- Photochemistry
- Biophysics
- Computational Chemistry
Background:
- Fluorescent proteins like Dreiklang are crucial for biological imaging and manipulation.
- Understanding the photoswitching mechanism of fluorescent proteins is key to their application.
- Dreiklang exhibits light-induced switching between fluorescent ON and non-fluorescent OFF states.
Purpose of the Study:
- To computationally elucidate the mechanism of light-induced chromophore hydration in Dreiklang.
- To investigate the transition from the ON-state to the OFF-state.
- To characterize the reaction intermediate and product of the photoswitching process.
Main Methods:
- Computational study employing potential energy surface calculations.
- Exploration of charge-transfer excited-state and ground-state energy surfaces.
- Simulations of system evolution to identify reaction pathways and intermediates.
Main Results:
- Located minimum energy conical intersection points between excited and ground states.
- Characterized the ground-state reaction intermediate.
- Identified the final reaction product, clarifying the photoswitching pathway.
- Confirmed that chromophore chemical modification governs the photoswitching mechanism.
Conclusions:
- The study clarifies the detailed photoswitching mechanism of the fluorescent protein Dreiklang.
- Light-induced chromophore hydration is the key process driving the ON-to-OFF state transition.
- Computational methods provide valuable insights into the dynamics of fluorescent proteins.
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