Related Experiment Video
Updated: Aug 13, 2025

Microfluidic Tools for Probing Fungal-Microbial Interactions at the Cellular Level
Published on: June 23, 2022
Raman microscopy tracks maturity of melanin intermediates in Botrytis cinerea, a plant pathogen
Victor V Volkov1, Ayesha Sadaf1, Carole C Perry1
1Interdisciplinary Biomedical Research Centre, School of Science and Technology, Nottingham Trent University Nottingham NG11 8NS UK +44 (0)115 8486695 carole.perry@ntu.ac.uk.
Abstract:
We use Raman microscopy to describe the structure and chemical composition of both conidiophore and hyphae of Botrytis cinerea, a common plant pathogen. To interpret experimental data, we use density functional theory (DFT) to compute Raman tensors specific to an important fungal glycopeptide, a segment of α-chitin, and several naphthalene-based precursors of increasing complexity, which we propose play a role in the melanin synthesis pathway. Using spectral interpretations based on quantum chemical validation, we review microscopy images reconstructed for specific Raman activities and describe differences in distributions of structural components, photo-protective secondary naphthalene-based pigments, and proteins in both spores and hyphal filaments. Comparison of our results with literature data on other fungi suggests an example of convergent evolution expressed at the level of secondary metabolites specific to plant pathogenic fungi. Our results indicate that pre-resonant Raman monitoring of melanin precursors may help assessment of local Botrytis population biology to aid agricultural production.
Insights
Raman microscopy and DFT reveal the chemical makeup of Botrytis cinerea, a plant pathogen. Monitoring melanin precursors could help assess fungal populations for agriculture.
Area of Science:
- Biophysics
- Mycology
- Spectroscopy
Background:
- Botrytis cinerea is a significant fungal plant pathogen impacting agriculture.
- Understanding its structure and chemical composition is crucial for disease management.
- Melanin synthesis is a key pathway in fungal virulence and protection.
Purpose of the Study:
- To characterize the structure and chemical composition of Botrytis cinerea conidiophores and hyphae using Raman microscopy.
- To computationally validate spectral interpretations using density functional theory (DFT) for fungal components and melanin precursors.
- To investigate the distribution of structural elements, pigments, and proteins within the fungus.
Main Methods:
- Raman microscopy was employed to analyze the chemical fingerprint of B. cinerea.
- Density functional theory (DFT) calculations were performed to compute Raman tensors for chitin, glycopeptides, and naphthalene derivatives.
- Spectral data were correlated with microscopy images to map molecular distributions.
Main Results:
- Distinct Raman spectral signatures were identified for different fungal structures and components.
- DFT calculations provided validation for interpreting experimental spectra, particularly for melanin precursors.
- Differences in the distribution of structural components, pigments, and proteins were observed between spores and hyphae.
Conclusions:
- The study elucidates the chemical composition of B. cinerea, highlighting the role of naphthalene-based compounds in melanin synthesis.
- Findings suggest convergent evolution in secondary metabolite production among plant pathogenic fungi.
- Pre-resonant Raman monitoring of melanin precursors offers a potential tool for assessing B. cinerea population biology in agricultural settings.
More Related Videos
07:36Visualizing Early Infection Sites of Rice Blast Disease Magnaporthe oryzae on Barley Hordeum vulgare Using a Basic Microscope and a Smartphone
Published on: March 17, 2023
06:58Combining Clearing and Fluorescence Microscopy for Visualising Changes in Gene Expression and Physiological Responses to Plasmodiophora brassicae
Published on: August 5, 2022