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Development and Validation of Predictive Quantitative Structure-Activity Relationship Models for Estrogenic
Lukman K Akinola1,2, Adamu Uzairu1, Gideon A Shallangwa1
1Department of Chemistry, Ahmadu Bello University, Zaria, Nigeria.
Abstract:
Disruption of the endocrine system by hydroxylated polychlorinated biphenyls (OH-PCBs) is hypothesized, among other potential mechanisms, to be mediated via nuclear receptor binding. Due to the high cost and lengthy time required to produce high-quality experimental data, empirical data to support the nuclear receptor binding hypothesis are in short supply. In the present study, two quantitative structure-activity relationship models were developed for predicting the estrogenic activities of OH-PCBs. Findings revealed that model I (for the estrogen receptor α dataset) contained five two-dimensional (2D) descriptors belonging to the classes autocorrelation, Burden modified eigenvalues, chi path, and atom type electrotopological state, whereas model II (for the estrogen receptor β dataset) contained three 2D and three 3D descriptors belonging to the classes autocorrelation, atom type electrotopological state, and Radial Distribution Function descriptors. The internal and external validation metrics reported for models I and II indicate that both models are robust, reliable, and suitable for predicting the estrogenic activities of untested OH-PCB congeners. Environ Toxicol Chem 2023;42:823-834. © 2023 SETAC.
Insights
Quantitative structure-activity relationship models predict hydroxylated polychlorinated biphenyls (OH-PCBs) estrogenic activity. These models aid in understanding endocrine disruption by OH-PCBs without extensive experimental testing.
Area of Science:
- Environmental toxicology
- Endocrinology
- Computational chemistry
Background:
- Hydroxylated polychlorinated biphenyls (OH-PCBs) are suspected endocrine disruptors.
- Nuclear receptor binding is a proposed mechanism for OH-PCB endocrine disruption.
- Experimental data on OH-PCB nuclear receptor binding are limited due to cost and time.
Purpose of the Study:
- To develop predictive models for the estrogenic activities of OH-PCBs.
- To support the hypothesis that OH-PCBs mediate endocrine disruption via nuclear receptor binding.
- To provide tools for assessing the risks of untested OH-PCB congeners.
Main Methods:
- Development of two quantitative structure-activity relationship (QSAR) models.
- Model I: Prediction of estrogenic activity for the estrogen receptor alpha (ERα) dataset using five 2D descriptors.
- Model II: Prediction of estrogenic activity for the estrogen receptor beta (ERβ) dataset using three 2D and three 3D descriptors.
Main Results:
- Model I incorporated descriptors from autocorrelation, Burden modified eigenvalues, chi path, and atom type electrotopological state classes.
- Model II utilized descriptors from autocorrelation, atom type electrotopological state, and Radial Distribution Function classes.
- Both models demonstrated robust, reliable internal and external validation metrics.
Conclusions:
- The developed QSAR models are suitable for predicting the estrogenic activities of novel OH-PCB congeners.
- These models can help prioritize OH-PCBs for further experimental investigation.
- The findings contribute to understanding the environmental toxicology and endocrine-disrupting potential of OH-PCBs.
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