Related Experiment Video
Updated: Aug 13, 2025

Discovery of Driver Genes in Colorectal HT29-derived Cancer Stem-Like Tumorspheres
Published on: July 22, 2020
Gene Expression Profiles in Cancers and Their Therapeutic Implications
1From the Dan L. Duncan Comprehensive Cancer Center Division of Biostatistics, Human Genome Sequencing Center, and Department of Medicine, Baylor College of Medicine; and Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX.
Gene expression profiling of public cancer data reveals molecular subtypes, predicts patient outcomes, and identifies therapeutic targets. This review explores accessing and analyzing these datasets for cancer research.
Area of Science:
- Oncology
- Genomics
- Bioinformatics
Background:
- Publicly available gene expression data from tumors and cell lines offer valuable insights into cancer biology.
- Gene expression profiling can identify molecular subtypes, predict patient outcomes, and guide therapeutic strategies.
Approach:
- This review provides an overview of gene expression profiling techniques in cancer research.
- It details methods for accessing and analyzing public gene expression datasets.
- Specific examples include pan-cancer subtyping and analysis of chemotherapy response.
Key Points:
- Gene expression data aids in identifying molecular subtypes and predicting patient survival.
- Analysis can reveal markers for therapeutic response and elucidate cancer biology.
- Public datasets are a rich resource for exploring cancer genomics.
Conclusions:
- Gene expression profiling is a powerful tool for advancing cancer research and personalized medicine.
- Leveraging public data facilitates discovery of novel biomarkers and therapeutic targets.
- This approach enhances our understanding of cancer heterogeneity and progression.
More Related Videos
07:42Assessment of Resistance to Tyrosine Kinase Inhibitors by an Interrogation of Signal Transduction Pathways by Antibody Arrays
Published on: September 19, 2018
09:37Defining Gene Functions in Tumorigenesis by Ex vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells
Published on: August 25, 2021
Related Concept Videos
Targeted Cancer Therapies
There are several types of targeted therapies against...
Combination Therapies and Personalized Medicine
The combination of the drug acetazolamide and sulforaphane is a good example of combination therapy to treat cancer. The cells in the interior of a large tumor often die due to the hypoxic and...
Cancer-Critical Genes II: Tumor Suppressor Genes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...
Mitogens and the Cell Cycle
Cancer-Critical Genes I: Proto-oncogenes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...
Cancer