Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Multi-Step Reactions02:31

Multi-Step Reactions

7.4K
Chemical reactions often occur in a stepwise fashion involving two or more distinct reactions taking place in a sequence. A balanced equation indicates the reacting species and the product species, but it reveals no details about how the reaction occurs at the molecular level. The reaction mechanism (or reaction path) provides details regarding the precise, step-by-step process by which a reaction occurs. Each of the steps in a reaction mechanism is called an elementary reaction. These...
7.4K
Classification of Titrimetric Analysis Based on Reaction Types01:01

Classification of Titrimetric Analysis Based on Reaction Types

800
Titrimetric analysis in solution chemistry involves measuring the volume of solutions and is often called volumetric analysis. The standard solution of known concentration in the burette is called the titrant, whereas the solution of unknown concentration in the flask is called the analyte, or titrand. Titrimetric analyses can be classified into four types based on the reactions between the titrant and analyte.
Titrations between an acid and a base lead to neutralization reactions that form...
800
Reaction Mechanisms03:06

Reaction Mechanisms

26.2K
Chemical reactions often occur in a stepwise fashion, involving two or more distinct reactions taking place in a sequence. A balanced equation indicates the reacting species and the product species, but it reveals no details about how the reaction occurs at the molecular level. The reaction mechanism (or reaction path) provides details regarding the precise, step-by-step process by which a reaction occurs.
For instance, the decomposition of ozone appears to follow a mechanism with two steps:
26.2K
Rate-Determining Steps03:08

Rate-Determining Steps

33.1K
Relating Reaction Mechanisms
In a multistep reaction mechanism, one of the elementary steps progresses significantly slower than the others. This slowest step is called the rate-limiting step (or rate-determining step). A reaction cannot proceed faster than its slowest step, and hence, the rate-determining step limits the overall reaction rate.
The concept of rate-determining step can be understood from the analogy of a 4-lane freeway with a short-stretch of traffic-bottleneck caused due to...
33.1K
SN2 Reaction: Mechanism02:27

SN2 Reaction: Mechanism

14.6K
The kinetic studies of SN2 reactions suggest an essential feature of its mechanism: it is a single-step process without intermediates. Here, both the nucleophile and the substrate participate in the rate-determining step.
The presence of the more electronegative halogen in the substrate creates a polarized carbon-halide bond. The halide pulls the electron cloud generating an electrophilic center at the carbon atom. Thus, the carbon atom carries a partial positive charge while the halide has a...
14.6K
E1 Reaction: Kinetics and Mechanism02:46

E1 Reaction: Kinetics and Mechanism

15.6K
Here, in contrast to the E2 reaction mechanism, we delve into the aspects of the E1 reaction mechanism, which has two steps: rate-limiting loss of the leaving group and abstraction of the beta hydrogen by a weak base. Typically, the experimental proof for the E1 mechanism is via kinetic studies or isotope studies. While the former demonstrates the first-order kinetics—the dependence of the reaction solely on substrate concentration—the latter proves the abstraction of hydrogen only...
15.6K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Systematic discovery of UFM1 receptors reveals a regulatory module in DNA repair directing non-homologous end-joining.

Nature communications·2026
Same author

Precision installation of silyl synthetic handles within arenes by regiocontrolled ruthenium C(<i>sp</i> <sup>2</sup>)-H functionalization.

Nature catalysis·2025
Same author

Sorafenib-Drug Delivery Strategies in Primary Liver Cancer.

Journal of functional biomaterials·2025
Same author

Borate-catalysed direct amidation reactions of coordinating substrates.

Chemical science·2025
Same author

Bis-Cycloruthenated Complexes in Visible Light-Induced C-H Alkylation with Epoxides.

Journal of the American Chemical Society·2025
Same author

Engineered enzymes for enantioselective nucleophilic aromatic substitutions.

Nature·2025
Same journal

Daily briefing: 'Cyborg' cockroaches breathe underwater with printed suit.

Nature·2026
Same journal

China boosts prestigious grants for young scientists - will it ease competition?

Nature·2026
Same journal

Incoming US science academy chief vows to 'double down' on research.

Nature·2026
Same journal

Author Correction: Synthesis of enantioenriched atropisomers by biocatalytic deracemization.

Nature·2026
Same journal

Electrodeposited self-assembled molecules for perovskite photovoltaics.

Nature·2026
Same journal

Neutrino's nursery found: the 'Shadow Blaster'.

Nature·2026
See all related articles

Related Experiment Video

Updated: Aug 12, 2025

A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data
09:34

A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data

Published on: September 25, 2021

4.0K

Organic reaction mechanism classification using machine learning.

Jordi Burés1, Igor Larrosa2

  • 1Department of Chemistry, The University of Manchester, Manchester, UK. jordi.bures@manchester.ac.uk.

Nature
|January 25, 2023
PubMed
Summary
This summary is machine-generated.

A new deep neural network model can automatically classify catalytic organic reaction mechanisms from kinetic data. This AI-driven approach enhances accuracy and efficiency in mechanistic elucidation, even with noisy or limited data.

More Related Videos

Machine Learning Algorithms for Early Detection of Bone Metastases in an Experimental Rat Model
07:15

Machine Learning Algorithms for Early Detection of Bone Metastases in an Experimental Rat Model

Published on: August 16, 2020

6.9K
Development of Heterogeneous Enantioselective Catalysts using Chiral Metal-Organic Frameworks MOFs
08:25

Development of Heterogeneous Enantioselective Catalysts using Chiral Metal-Organic Frameworks MOFs

Published on: January 17, 2020

7.3K

Related Experiment Videos

Last Updated: Aug 12, 2025

A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data
09:34

A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data

Published on: September 25, 2021

4.0K
Machine Learning Algorithms for Early Detection of Bone Metastases in an Experimental Rat Model
07:15

Machine Learning Algorithms for Early Detection of Bone Metastases in an Experimental Rat Model

Published on: August 16, 2020

6.9K
Development of Heterogeneous Enantioselective Catalysts using Chiral Metal-Organic Frameworks MOFs
08:25

Development of Heterogeneous Enantioselective Catalysts using Chiral Metal-Organic Frameworks MOFs

Published on: January 17, 2020

7.3K

Area of Science:

  • Catalysis
  • Chemical kinetics
  • Artificial intelligence in chemistry

Background:

  • Mechanistic understanding of catalytic organic reactions is vital for catalyst design and sustainable chemistry.
  • Traditional kinetic analysis methods rely on approximations and are limited to simple reaction networks.
  • Deriving rate laws can be prone to human error and is challenging for complex systems.

Purpose of the Study:

  • To develop an automated method for elucidating catalytic organic reaction mechanisms using kinetic data.
  • To overcome limitations of traditional kinetic analysis, including handling complex mechanisms and noisy data.
  • To provide a powerful AI tool for streamlining mechanistic elucidation in organic chemistry.

Main Methods:

  • Training a deep neural network model on ordinary kinetic data.
  • Utilizing the trained model to automatically classify reaction mechanism classes.
  • Evaluating the model's performance on various mechanism types, including those out of steady state.

Main Results:

  • The deep neural network model accurately identifies diverse reaction mechanism classes.
  • The model performs well even with kinetic data containing significant error or few data points.
  • It successfully elucidates mechanisms operating outside of steady-state conditions, such as those with catalyst activation/deactivation.

Conclusions:

  • AI-guided mechanism classification is a powerful and automatable tool for mechanistic elucidation.
  • This approach significantly streamlines the process compared to traditional methods.
  • The freely available model is expected to accelerate the development of automated organic reaction discovery.