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Updated: Aug 12, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Cutevariant: a standalone GUI-based desktop application to explore genetic variations from an annotated VCF file
Sacha Schutz1,2, Charles Monod-Broca2, Lucas Bourneuf3
1Univ Brest, Inserm, EFS, UMR 1078, GGB, Brest 29200, France.
Summary:
Cutevariant is a graphical user interface (GUI)-based desktop application designed to filter variations from annotated VCF file. The application imports data into a local SQLite database where complex filter queries can be built either from GUI controllers or using a domain-specific language called Variant Query Language. Cutevariant provides more features than existing applications and is fully customizable thanks to a complete plugins architecture.
Availability And Implementation:
Cutevariant is distributed as a multiplatform client-side software under an open source license and is available at https://github.com/labsquare/cutevariant.
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