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Simultaneous Hydrogen Bonds with Different Binding Modes: The Acceptor "Rules" but the Donor "Chooses"

Marianne Rica Garcia1, Iñigo Iribarren1, Isabel Rozas1

  • 1School of Chemistry, Trinity College Dublin, The University of Dublin, 154-160 Pearse Street, D02 R590, Dublin, Ireland.

Chemistry (Weinheim an Der Bergstrasse, Germany)
|January 26, 2023
PubMed

This computational work studies the different hydrogen bond (HB) binding modes that can be established between neighbouring HB donors and acceptors in structures with relevance in catalysis and biology. To analyse the electronic effect on the σ-hole, unsubstituted HB donors and ones with two different substituents, an electron withdrawing (EWG), and an electron donating (EDG) group, were studied. Upon complexation, three different binding modes were observed: bifurcated, parallel, and zigzag. It was found that, as a general trend, HBs within a parallel pattern are the strongest followed by those within bifurcated and zigzag binding modes, leading to a "competition" between the last two. Similar patterns and trends have been found in experimental structures found in a search within the CSD. In conclusion, even though the HB acceptors "rule" the pattern and strength of the HB interactions within the dimers, when there is an option for different binding modes within a particular dimer, the HB donors "choose" the type of binding established.

Keywords:
NBOQTAIMcomputational chemistryhydrogen bondsnoncovalent interactions

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