Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Predicting Molecular Geometry02:27

Predicting Molecular Geometry

34.6K
VSEPR Theory for Determination of Electron Pair Geometries
34.6K
Crystal Field Theory - Octahedral Complexes02:58

Crystal Field Theory - Octahedral Complexes

27.1K
Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
27.1K
Metal-Ligand Bonds02:51

Metal-Ligand Bonds

21.3K
The hemoglobin in the blood, the chlorophyll in green plants, vitamin B-12, and the catalyst used in the manufacture of polyethylene all contain coordination compounds. Ions of the metals, especially the transition metals, are likely to form complexes.
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
21.3K
Transformers01:26

Transformers

1.1K
A device that transforms voltages from one value to another using induction is called a transformer. A transformer consists of two separate coils, or windings, wrapped around the same soft iron core. However, they are electrically insulated from each other.
The iron core has a substantial relative permeability. Therefore, the magnetic field lines generated due to the current in one winding are almost entirely confined within the core, such that the same magnetic flux permeates each turn of both...
1.1K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Polymer-Agent: Large Language Model Agent for Polymer Design.

Journal of chemical information and modeling·2026
Same author

Large Language Model Agent for Modular Task Execution in Drug Discovery.

Journal of chemical information and modeling·2026
Same author

MOFGPT: Generative Design of Metal-Organic Frameworks using Language Models.

Journal of chemical information and modeling·2025
Same author

Protein Structure-Function Relationship: A Kernel-PCA Approach for Reaction Coordinate Identification.

Journal of chemical theory and computation·2025
Same author

AggreBots: configuring CiliaBots through guided, modular tissue aggregation.

bioRxiv : the preprint server for biology·2025
Same author

Multi-Peptide: Multimodality Leveraged Language-Graph Learning of Peptide Properties.

Journal of chemical information and modeling·2024

Related Experiment Video

Updated: Aug 12, 2025

Author Spotlight: Characterizing Porous Materials for Aiding the Development of Robust Metal-Organic Frameworks with Adsorption Behavior
06:45

Author Spotlight: Characterizing Porous Materials for Aiding the Development of Robust Metal-Organic Frameworks with Adsorption Behavior

Published on: March 8, 2024

7.8K

MOFormer: Self-Supervised Transformer Model for Metal-Organic Framework Property Prediction.

Zhonglin Cao1, Rishikesh Magar1, Yuyang Wang1

  • 1Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania15213, United States.

Journal of the American Chemical Society
|January 27, 2023
PubMed
Summary

We developed MOFormer, a deep learning model that predicts properties of metal-organic frameworks (MOFs) using only their text identifiers. This structure-agnostic approach accelerates the discovery of optimal MOFs for various applications.

More Related Videos

Author Spotlight: Exploring Self-Assembled MOF-Polymer Composites
06:48

Author Spotlight: Exploring Self-Assembled MOF-Polymer Composites

Published on: June 14, 2024

1.8K
Synthesis and Characterization of Functionalized Metal-organic Frameworks
11:27

Synthesis and Characterization of Functionalized Metal-organic Frameworks

Published on: September 5, 2014

48.2K

Related Experiment Videos

Last Updated: Aug 12, 2025

Author Spotlight: Characterizing Porous Materials for Aiding the Development of Robust Metal-Organic Frameworks with Adsorption Behavior
06:45

Author Spotlight: Characterizing Porous Materials for Aiding the Development of Robust Metal-Organic Frameworks with Adsorption Behavior

Published on: March 8, 2024

7.8K
Author Spotlight: Exploring Self-Assembled MOF-Polymer Composites
06:48

Author Spotlight: Exploring Self-Assembled MOF-Polymer Composites

Published on: June 14, 2024

1.8K
Synthesis and Characterization of Functionalized Metal-organic Frameworks
11:27

Synthesis and Characterization of Functionalized Metal-organic Frameworks

Published on: September 5, 2014

48.2K

Area of Science:

  • Materials Science
  • Computational Chemistry
  • Machine Learning

Background:

  • Metal-organic frameworks (MOFs) possess high porosity, enabling diverse applications.
  • The vast chemical space of MOFs necessitates efficient screening for optimal material discovery.
  • Current high-throughput screening methods, like DFT, are computationally intensive and require 3D structures.

Purpose of the Study:

  • To propose a novel, structure-agnostic deep learning method for accelerated MOF property prediction.
  • To circumvent the need for 3D atomic structures in evaluating hypothetical MOFs.
  • To enhance the efficiency and accuracy of MOF screening for specific applications.

Main Methods:

  • Developed MOFormer, a Transformer-based deep learning model for MOF property prediction.
  • Utilized a structure-agnostic approach, taking MOF text string representations (MOFid) as input.
  • Introduced a self-supervised learning framework to pretrain MOFormer using >400k public MOF data, correlating structure-agnostic and structure-based representations.

Main Results:

  • MOFormer achieved state-of-the-art structure-agnostic prediction accuracy compared to existing descriptors.
  • Pretraining the MOFormer model significantly improved prediction accuracy for downstream tasks.
  • MOFormer demonstrated superior data efficiency for quantum-chemical property prediction compared to structure-based models like CGCNN, especially with limited data.

Conclusions:

  • MOFormer offers a novel and efficient deep learning perspective for MOF property prediction.
  • The structure-agnostic approach accelerates the screening process for discovering new MOFs.
  • Self-supervised pretraining enhances the performance and data efficiency of MOF property prediction models.