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Deep Quantile Regression for Uncertainty Estimation in Unsupervised and Supervised Lesion Detection.
Haleh Akrami1, Anand A Joshi2, Sergül Aydöre3
1Department of Biomedical Engineering, University of Southern California, Los Angeles, USA.
This study introduces quantile regression to quantify uncertainty in deep learning for lesion detection. The novel methods, QR-VAE and BQR, improve accuracy in both unsupervised and supervised settings, crucial for medical diagnosis.
Area of Science:
- Machine Learning
- Medical Image Analysis
- Deep Learning
Background:
- Deep learning models can be over-confident, especially with limited data.
- Quantifying uncertainty is critical for medical applications like lesion detection and diagnosis.
- Existing Variational AutoEncoder (VAE) methods suffer from variance shrinkage.
Purpose of the Study:
- To propose quantile regression for quantifying aleatoric uncertainty in lesion detection.
- To develop unsupervised (QR-VAE) and supervised (BQR) methods for uncertainty quantification.
- To improve the reliability of deep learning in critical medical applications.
Main Methods:
- Quantile regression applied to unsupervised lesion detection using a Variational AutoEncoder (VAE).
- Developed Quantile-Regression VAE (QR-VAE) to avoid variance shrinkage by directly estimating conditional quantiles.
- Developed Binary Quantile Regression (BQR) for supervised lesion segmentation.
Main Results:
- QR-VAE effectively quantifies uncertainty in VAE reconstructions for outlier detection.
- BQR captures uncertainty in lesion boundaries, reflecting expert disagreement.
- Both methods enhance lesion detection and segmentation accuracy.
Conclusions:
- Quantile regression offers a robust approach to aleatoric uncertainty quantification in deep learning for medical imaging.
- The proposed QR-VAE and BQR methods provide more reliable confidence estimates than standard VAEs.
- These advancements are vital for trustworthy clinical diagnosis and treatment planning.
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