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lncRNA LINC00960 promotes apoptosis by sponging ubiquitin ligase Nrdp1-targeting miR-183-5p
Hao Yang1,2, Tianxia Jiang2, Libin Fan1
1College of Life Sciences, Anhui Medical University, Hefei 230032, China.
Abstract:
The ubiquitin ligase Nrdp1/RNF41 promotes the ubiquitin-dependent degradation of multiple important substrates, including BRUCE/BIRC6, a giant ubiquitin-conjugating enzyme inhibiting both apoptosis and autophagy. miR-183-5p is associated with various malignancies potentially by targeting dozens of genes. Here, we show that the lncRNA LINC00960 binds to the Nrdp1-targeting miR-183-5p and promotes apoptosis. Compared to other known miR-183-5p targets, Nrdp1 mRNA is among the few with top scores to complement miR-183-5p. miR-183-5p binds to the 3'UTR of Nrdp1 mRNA and downregulates Nrdp1 at both the mRNA and protein levels. The miR-183-5p mimics inhibit DNA damage-induced apoptosis probably by upregulating BRUCE level, whereas the miR-183-5p inhibitor suppresses the effects of miR-183-5p. LINC00960 is the noncoding RNA with the highest score to complement miR-183-5p. LINC00960 overexpression reduces, but its knockdown increases, the level of miR-183-5p, whereas LINC00960 overexpression increases, but its knockdown decreases, the level of Nrdp1 and apoptosis. Importantly, the expression of LINC00960, which is associated with multiple types of tumors, positively correlates with that of Nrdp1 in several tumors but inversely correlates with that of miR-183-5p in multiple human tumor cell lines, as analysed by quantitative PCR. Thus, miR-183-5p downregulates Nrdp1 expression and inhibits apoptosis, whereas LINC00960 upregulates Nrdp1 and promotes apoptosis by inhibiting miR-183-5p. These results may provide new ideas for the prevention, diagnosis and treatment of apoptosis-related diseases, such as tumors and neurodegenerative diseases.
Insights
The long noncoding RNA LINC00960 promotes apoptosis by inhibiting miR-183-5p, which normally downregulates Nrdp1. This pathway impacts cancer and neurodegenerative diseases.
Area of Science:
- Molecular Biology
- Cancer Biology
- Cell Death Research
Background:
- The ubiquitin ligase Nrdp1/RNF41 targets substrates like BRUCE/BIRC6, regulating apoptosis and autophagy.
- MicroRNA miR-183-5p is implicated in malignancies and targets numerous genes, including Nrdp1 mRNA.
- Long noncoding RNA LINC00960's role in regulating gene expression and apoptosis is under investigation.
Purpose of the Study:
- To investigate the regulatory relationship between LINC00960, miR-183-5p, and Nrdp1 in the context of apoptosis.
- To determine the functional impact of this regulatory axis on apoptosis and its potential relevance in diseases like cancer.
Main Methods:
- Quantitative PCR to analyze gene expression levels of LINC00960, miR-183-5p, and Nrdp1 in tumor cell lines.
- Luciferase reporter assays to confirm the binding of miR-183-5p to the 3'UTR of Nrdp1 mRNA.
- Overexpression and knockdown experiments to assess the functional effects of LINC00960 and miR-183-5p on Nrdp1 levels and apoptosis.
Main Results:
- miR-183-5p directly targets Nrdp1 mRNA, downregulating its expression and inhibiting apoptosis.
- LINC00960 binds to miR-183-5p, inhibiting its activity and consequently upregulating Nrdp1 and promoting apoptosis.
- Expression levels of LINC00960 positively correlate with Nrdp1 and inversely with miR-183-5p in human tumor samples.
Conclusions:
- LINC00960 acts as a tumor suppressor by upregulating Nrdp1 and promoting apoptosis via inhibition of miR-183-5p.
- This LINC00960/miR-183-5p/Nrdp1 axis represents a novel regulatory mechanism in apoptosis.
- Findings suggest potential therapeutic strategies for apoptosis-related diseases, including cancers and neurodegenerative disorders.
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