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Landscape of pathogenic mutations in premature ovarian insufficiency
Hanni Ke1,2, Shuyan Tang3, Ting Guo1,2
1Center for Reproductive Medicine, Cheeloo College of Medicine, Shandong University, Jinan, China.
Insights
Genetic analysis of 1,030 patients with premature ovarian insufficiency (POI) identified 20 new genes linked to the condition. These findings expand the genetic understanding of POI, a key cause of female infertility, and may improve diagnostic screenings.
Area of Science:
- Genetics
- Reproductive Biology
- Endocrinology
Background:
- Premature ovarian insufficiency (POI) is a significant cause of female infertility, characterized by the early loss of ovarian function.
- The molecular basis of POI is complex and not fully understood, necessitating further genetic investigation.
Purpose of the Study:
- To identify genetic variants associated with premature ovarian insufficiency (POI).
- To expand the understanding of the genetic landscape underlying POI and its contribution to female infertility.
Main Methods:
- Whole-exome sequencing was performed on a cohort of 1,030 patients diagnosed with POI.
- Association analyses were conducted comparing the POI cohort with a control group of 5,000 individuals without POI.
Main Results:
- 195 pathogenic/likely pathogenic variants were found in 59 known POI-causative genes, explaining 18.7% of cases.
- Association analyses identified 20 novel POI-associated genes, with significant burden of loss-of-function variants.
- Pathogenic variants in known and novel genes collectively accounted for 23.5% of POI cases.
- Genetic contribution to POI was higher in patients with primary amenorrhea than secondary amenorrhea.
Conclusions:
- This study significantly expands the catalog of genes associated with premature ovarian insufficiency (POI).
- The identified genes are involved in critical ovarian functions, including development, meiosis, and folliculogenesis.
- These findings offer potential for improved genetic screening and diagnosis of POI, aiding in understanding female infertility.
Abstract:
Premature ovarian insufficiency (POI) is a major cause of female infertility due to early loss of ovarian function. POI is a heterogeneous condition, and its molecular etiology is unclear. To identify genetic variants associated with POI, here we performed whole-exome sequencing in a cohort of 1,030 patients with POI. We detected 195 pathogenic/likely pathogenic variants in 59 known POI-causative genes, accounting for 193 (18.7%) cases. Association analyses comparing the POI cohort with a control cohort of 5,000 individuals without POI identified 20 further POI-associated genes with a significantly higher burden of loss-of-function variants. Functional annotations of these novel 20 genes indicated their involvement in ovarian development and function, including gonadogenesis (LGR4 and PRDM1), meiosis (CPEB1, KASH5, MCMDC2, MEIOSIN, NUP43, RFWD3, SHOC1, SLX4 and STRA8) and folliculogenesis and ovulation (ALOX12, BMP6, H1-8, HMMR, HSD17B1, MST1R, PPM1B, ZAR1 and ZP3). Cumulatively, pathogenic and likely pathogenic variants in known POI-causative and novel POI-associated genes contributed to 242 (23.5%) cases. Further genotype-phenotype correlation analyses indicated that genetic contribution was higher in cases with primary amenorrhea compared to that in cases with secondary amenorrhea. This study expands understanding of the genetic landscape underlying POI and presents insights that have the potential to improve the utility of diagnostic genetic screenings.
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