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Updated: Aug 11, 2025

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
Downregulation of CAMK2N1 due to DNA Hypermethylation Mediated by DNMT1 that Promotes the Progression of Prostate
Wei Peng1,2, Huan Feng1,2, Linhao Pang3
1Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Abstract:
Calcium/calmodulin-dependentprotein kinase II inhibitor I (CAMK2N1) as one of the tumor suppressor genes is significantly downregulated in prostate cancer (PCa). Reduced expression of CAMK2N1 is positively correlated with PCa progression. However, the mechanisms of CAMK2N1 downregulation in PCa are still unclear. The promoter region of CAMK2N1 contains a large number of CG loci, providing the possibility for DNA methylation. Consequently, we hypothesized that DNA methylation can result in the reduced expression of CAMK2N1 in PCa. In the presented study, the DNA methylation level of CAMK2N1 in prostate cells and clinical specimens was determined by bisulfite sequencing (BS), pyrosequencing, and in silico analysis. Results showed that CAMK2N1 was highly methylated in PCa cells and tissues compared to normal prostate epithelial cells and nonmalignant prostate tissues, which was associated with the clinicopathological characteristics in PCa patients. Afterwards, we explored the expression of CAMK2N1 and its DNA methylation level by qRT-PCR, western blot, BS, and methylation-specific PCR in PCa cells after 5-Aza-CdR treatment or DNMT1 genetic modification, which demonstrated that the reduced expression of CAMK2N1 can be restored by 5-Aza-CdR treatment via demethylation. Moreover, DNMT1 formed a positive feedback loop with CAMK2N1 in PCa cells. The expression of CAMK2N1 was downregulated by DNMT1-mediated DNA methylation, which reversely induced DNMT1 expression through activating AKT or ERK signaling pathway. Finally, functional assays including wound healing, invasion, and migration assay, as well as the xenograft model in nude mice indicated that CAMK2N1 inhibited the invasion, migration, and proliferation of PCa cells and these effects were reversed by DNMT1 overexpression. In conclusion, DNMT1-mediated hypermethylation of CAMK2N1 not only downregulates the gene expression but also promotes the progression of PCa.
Insights
DNA methylation silences the tumor suppressor gene CAMK2N1 in prostate cancer (PCa), promoting its progression. Restoring CAMK2N1 expression via demethylation inhibits PCa cell growth and invasion.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Calcium/calmodulin-dependent protein kinase II inhibitor I (CAMK2N1) is a tumor suppressor gene downregulated in prostate cancer (PCa).
- The precise mechanisms driving CAMK2N1 downregulation in PCa remain largely unknown.
- The promoter region of CAMK2N1 presents numerous CG loci, suggesting a role for DNA methylation.
Purpose of the Study:
- To investigate the role of DNA methylation in CAMK2N1 downregulation in PCa.
- To elucidate the relationship between CAMK2N1 expression, DNA methylation, and PCa progression.
- To explore the feedback loop between DNMT1 and CAMK2N1 in PCa.
Main Methods:
- Bisulfite sequencing (BS), pyrosequencing, and in silico analysis to assess CAMK2N1 DNA methylation levels.
- Quantitative reverse transcription PCR (qRT-PCR) and Western blot to evaluate gene and protein expression.
- 5-Aza-CdR treatment and DNMT1 genetic modification to study demethylation effects.
- Functional assays (wound healing, invasion, migration) and xenograft models to assess PCa cell behavior.
Main Results:
- CAMK2N1 was significantly hypermethylated in PCa cells and tissues compared to normal controls, correlating with clinicopathological characteristics.
- Demethylation using 5-Aza-CdR treatment restored CAMK2N1 expression in PCa cells.
- DNMT1-mediated hypermethylation of CAMK2N1 downregulated its expression and promoted PCa cell invasion, migration, and proliferation.
- A positive feedback loop was identified where CAMK2N1 downregulation induced DNMT1 expression via AKT/ERK signaling.
Conclusions:
- DNMT1-mediated hypermethylation is a key mechanism for CAMK2N1 silencing in PCa.
- CAMK2N1 acts as a suppressor of PCa invasion, migration, and proliferation.
- Targeting DNMT1 or restoring CAMK2N1 expression may represent therapeutic strategies for PCa.
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