Everything is connected: Graph neural networks
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Updated: Aug 10, 2025

Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
1DeepMind, 6 Pancras Square, London, N1C 4AG, Greater London, UK; Department of Computer Science and Technology, University of Cambridge, 15 JJ Thomson Avenue, Cambridge, CB3 0FD, Cambridgeshire, UK.
Abstract:
In many ways, graphs are the main modality of data we receive from nature. This is due to the fact that most of the patterns we see, both in natural and artificial systems, are elegantly representable using the language of graph structures. Prominent examples include molecules (represented as graphs of atoms and bonds), social networks and transportation networks. This potential has already been seen by key scientific and industrial groups, with already-impacted application areas including traffic forecasting, drug discovery, social network analysis and recommender systems. Further, some of the most successful domains of application for machine learning in previous years-images, text and speech processing-can be seen as special cases of graph representation learning, and consequently there has been significant exchange of information between these areas. The main aim of this short survey is to enable the reader to assimilate the key concepts in the area, and position graph representation learning in a proper context with related fields.
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