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Method for Efficient Refolding and Purification of Chemoreceptor Ligand Binding Domain
Published on: December 12, 2017
Detergent headgroups control TolC folding in vitro
Ayotunde Paul Ikujuni1, S Jimmy Budiardjo2, Rik Dhar1
1Department of Molecular Biosciences, The University of Kansas, Lawrence, Kansas.
Abstract:
TolC is the trimeric outer membrane component of the efflux pump system in Escherichia coli that is responsible for antibiotic efflux from bacterial cells. Overexpression of efflux pumps has been reported to decrease susceptibility to antibiotics in a variety of bacterial pathogens. Reliable production of membrane proteins allows for the biophysical and structural characterization needed to better understand efflux and for the development of therapeutics. Preparation of recombinant protein for biochemical/structural studies often involves the production of proteins as inclusion body aggregates from which active proteins are recovered. Here, we find that the in vitro folding of TolC into its functional trimeric state from inclusion bodies is dependent on the headgroup composition of detergent micelles used. Nonionic detergent favors the formation of functional trimeric TolC, whereas zwitterionic detergents induce the formation of a non-native, oligomeric TolC fold. We also find that nonionic detergents with shorter alkyl lengths facilitate TolC folding. It remains to be seen whether the charges in lipid headgroups have similar effects on membrane insertion and folding in biological systems.
Insights
Detergent micelles influence the in vitro folding of TolC, an essential antibiotic efflux pump component. Nonionic detergents promote functional trimeric TolC formation, crucial for understanding and combating antibiotic resistance.
Area of Science:
- Biochemistry
- Structural Biology
- Microbiology
Background:
- TolC is the outer membrane protein of the Escherichia coli efflux pump system, mediating antibiotic expulsion.
- Overexpression of efflux pumps in bacterial pathogens reduces antibiotic susceptibility.
- Characterizing membrane proteins like TolC is vital for understanding efflux mechanisms and developing new therapeutics.
Purpose of the Study:
- To investigate the in vitro folding of TolC into its functional trimeric state from inclusion bodies.
- To determine the effect of detergent micelle headgroup composition on TolC folding.
- To identify optimal conditions for producing active TolC for further studies.
Main Methods:
- Recombinant TolC protein was produced and purified from inclusion bodies.
- In vitro refolding experiments were conducted using various detergents with different headgroup compositions and alkyl chain lengths.
- The oligomeric state and functional folding of refolded TolC were assessed using biophysical techniques.
Main Results:
- The in vitro folding of TolC into its functional trimeric form is critically dependent on the detergent micelle headgroup composition.
- Nonionic detergents promote the formation of functional trimeric TolC.
- Zwitterionic detergents lead to the formation of non-native, oligomeric TolC structures, while shorter alkyl chain nonionic detergents enhance folding.
Conclusions:
- Detergent choice is a key factor in achieving successful in vitro refolding of the trimeric TolC protein.
- Understanding these detergent-mediated folding pathways is essential for structural and biophysical characterization of TolC.
- Further research is needed to explore the impact of lipid headgroup charges on TolC folding in biological membranes.
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