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Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Antimicrobial susceptibility of bacterial isolates from clinical specimens in four Pacific Island countries,
Michael J Loftus1, Richard J Everts2, Allen C Cheng1,3
1Department of Infectious Diseases, The Alfred Hospital and Central Clinical School, Monash University, Melbourne, Australia.
Background:
There are limited antimicrobial resistance (AMR) surveillance data from low- and middle-income countries, especially from the Pacific Islands region. AMR surveillance data is essential to inform strategies for AMR pathogen control.
Methods:
We performed a retrospective analysis of antimicrobial susceptibility results from the national microbiology laboratories of four Pacific Island countries - the Cook Islands, Kiribati, Samoa and Tonga - between 2017 and 2021. We focused on four bacteria that have been identified as 'Priority Pathogens' by the World Health Organization: Staphylococcus aureus, Escherichia coli, Klebsiella pneumoniae and Pseudomonas aeruginosa.
Findings:
Following deduplication, a total of 20,902 bacterial isolates was included in the analysis. The most common organism was E. coli (n = 8455) followed by S. aureus (n = 7830), K. pneumoniae (n = 2689) and P. aeruginosa (n = 1928). The prevalence of methicillin resistance among S. aureus isolates varied between countries, ranging from 8% to 26% in the Cook Islands and Kiribati, to 43% in both Samoa and Tonga. Ceftriaxone susceptibility remained high to moderate among E. coli (87%-94%) and K. pneumoniae (72%-90%), whereas amoxicillin + clavulanate susceptibility was low against these two organisms (50%-54% and 43%-61%, respectively). High susceptibility was observed for all anti-pseudomonal agents (83%-99%).
Interpretation:
Despite challenges, these Pacific Island laboratories were able to conduct AMR surveillance. These data provide valuable contemporary estimates of AMR prevalence, which will inform local antibiotic formularies, treatment guidelines, and national priorities for AMR policy.
Funding:
Supported by the National Health and Medical Research Council.
Insights
Antimicrobial resistance (AMR) surveillance in Pacific Island countries reveals varying resistance levels in priority pathogens like Staphylococcus aureus. These findings are crucial for guiding local antibiotic use and AMR control strategies.
Area of Science:
- Global Health
- Infectious Diseases
- Microbiology
Background:
- Limited antimicrobial resistance (AMR) surveillance data exists for low- and middle-income countries, particularly in the Pacific Islands.
- AMR surveillance is critical for developing effective pathogen control strategies.
Purpose of the Study:
- To analyze antimicrobial susceptibility patterns of priority pathogens in four Pacific Island countries.
- To provide contemporary AMR prevalence data for the region.
Main Methods:
- Retrospective analysis of antimicrobial susceptibility results from 2017-2021.
- Focused on four World Health Organization priority pathogens: Staphylococcus aureus, Escherichia coli, Klebsiella pneumoniae, and Pseudomonas aeruginosa.
- Included 20,902 bacterial isolates from national microbiology laboratories.
Main Results:
- Prevalence of methicillin resistance in S. aureus ranged from 8% to 43% across the Cook Islands, Kiribati, Samoa, and Tonga.
- Ceftriaxone susceptibility was high to moderate for E. coli and K. pneumoniae, but amoxicillin+clavulanate susceptibility was low.
- High susceptibility was observed for P. aeruginosa against anti-pseudomonal agents (83%-99%).
Conclusions:
- Pacific Island laboratories demonstrated capacity for AMR surveillance despite challenges.
- The generated data offers valuable insights into AMR prevalence to inform local antibiotic policies and national AMR strategies.
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