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Measuring Deformability and Red Cell Heterogeneity in Blood by Ektacytometry
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Data for assessing red blood cell deformability from microscopy images using deep learning.

Erik S Lamoureux1,2, Emel Islamzada2,3, Matthew V J Wiens4

  • 1Department of Mechanical Engineering, University of British Columbia, 2054-6250 Applied Science Lane, Vancouver, BC V6T 1Z4, Canada.

Data in Brief
|February 17, 2023
PubMed
Summary
This summary is machine-generated.

Measuring red blood cell (RBC) deformability from microscopy images can assess RBC quality for transfusions. This dataset enables AI development for automated RBC deformability analysis.

Keywords:
Computer visionDatasetDeep learningDeformabilityMachine learningMicrofluidicsOptical microscopyRed blood cells

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Area of Science:

  • Biophysics
  • Cell Biology
  • Biomedical Engineering

Background:

  • Red blood cell (RBC) deformability is crucial for microvascular circulation.
  • Deformability varies between individuals and declines with aging, disease, and storage.
  • RBC deformability is a potential biomarker for blood transfusion quality assessment.

Purpose of the Study:

  • To create a dataset of live cell microscopy images of RBCs.
  • To enable the development of deep learning algorithms for RBC deformability assessment.
  • To facilitate automated and standardized measurement of RBC quality.

Main Methods:

  • Collected live cell microscopy images of RBC samples from 10 healthy donors.
  • Sorted RBCs into fractions based on deformability using a microfluidic ratchet device.
  • Imaged sorted RBC fractions using a Nikon Ti-2E inverted microscope with specific objectives and camera.

Main Results:

  • Generated a dataset of high-resolution microscopy images linked to specific RBC deformability fractions.
  • The dataset provides a basis for training machine learning models.
  • The data facilitates the association of visual cell characteristics with functional deformability.

Conclusions:

  • The developed dataset supports the creation of deep learning models for RBC deformability analysis.
  • Automated image-based assessment can improve RBC quality control for transfusions.
  • This approach offers a standardized and efficient method for evaluating RBC health.