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Updated: Aug 9, 2025

Deep-Tissue Three-Photon Fluorescence Microscopy in Intact Mouse and Zebrafish Brain
Published on: January 13, 2022
Miniature three-photon microscopy maximized for scattered fluorescence collection.
Chunzhu Zhao1, Shiyuan Chen2, Lifeng Zhang3
1National Biomedical Imaging Center, State Key Laboratory of Membrane Biology, Institute of Molecular Medicine, Peking-Tsinghua Center for Life Sciences, College of Future Technology, Peking University, Beijing, China. czzhao@pku.edu.cn.
A new miniature three-photon microscope (m3PM) overcomes scattering for deep brain imaging. This technology enables visualization of neural activity in the cortex and hippocampus of freely moving mice.
Area of Science:
- Neuroscience
- Microscopy
- Biomedical Engineering
Background:
- Deep-tissue multiphoton microscopy is challenged by photon diffusion and scattering.
- Imaging neural activity in deep brain structures requires advanced techniques.
Purpose of the Study:
- To develop a miniature three-photon microscope (m3PM) for enhanced deep-tissue imaging.
- To overcome scattering limitations in biological samples.
Main Methods:
- Designed a miniature three-photon microscope (m3PM) prioritizing fluorescence collection efficiency.
- Utilized safe laser power for imaging deep brain regions.
Main Results:
- Successfully imaged calcium activity throughout the entire cortex and dorsal hippocampal CA1 up to 1.2 mm depth.
- Detected sensorimotor behavior-correlated neural activity in freely moving mice during behavioral tasks.
- Demonstrated m3PM's capability in highly scattering regimes.
Conclusions:
- The m3PM enables unprecedented deep-brain imaging in vivo.
- Facilitates the study of neural mechanisms in deep cortex and subcortical structures in behaving animals.
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Super-resolution Fluorescence Microscopy
Confocal Fluorescence Microscopy
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