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Updated: Aug 9, 2025

Development of a Polymicrobial Colony Biofilm Model to Test Antimicrobials in Cystic Fibrosis
Published on: September 20, 2024
Antibiotic Resistance in Patients with Cystic Fibrosis: Past, Present, and Future
Evanthia P Perikleous1, Despoina Gkentzi2, Aris Bertzouanis2,3
1Medical School, Democritus University of Thrace, 68100 Alexandroupolis, Greece.
Abstract:
Patients with cystic fibrosis (CF) are repeatedly exposed to antibiotics, especially during the pulmonary exacerbations of the disease. However, the available therapeutic strategies are frequently inadequate to eradicate the involved pathogens and most importantly, facilitate the development of antimicrobial resistance (AMR). The evaluation of AMR is demanding; conventional culture-based susceptibility-testing techniques cannot account for the lung microenvironment and/or the adaptive mechanisms developed by the pathogens, such as biofilm formation. Moreover, features linked to modified pharmaco-kinetics and pulmonary parenchyma penetration make the dosing of antibiotics even more challenging. In this review, we present the existing knowledge regarding AMR in CF, we shortly review the existing therapeutic strategies, and we discuss the future directions of antimicrobial stewardship. Due to the increasing difficulty in eradicating strains that develop AMR, the appropriate management should rely on targeting the underlying resistance mechanisms; thus, the interest in novel, molecular-based diagnostic tools, such as metagenomic sequencing and next-generation transcriptomics, has increased exponentially. Moreover, since the development of new antibiotics has a slow pace, the design of effective treatment strategies to eradicate persistent infections represents an urgency that requires consorted work. In this regard, both the management and monitoring of antibiotics usage are obligatory and more relevant than ever.
Insights
Antimicrobial resistance (AMR) in cystic fibrosis (CF) complicates treatment, as conventional methods fail to detect pathogen adaptations like biofilms. Novel molecular diagnostics and targeted resistance mechanisms are crucial for effective antimicrobial stewardship in CF patients.
Area of Science:
- Microbiology
- Pulmonology
- Pharmacology
Background:
- Cystic fibrosis (CF) patients face recurrent antibiotic exposure, leading to challenges in pathogen eradication and the development of antimicrobial resistance (AMR).
- Conventional culture-based susceptibility testing is insufficient for evaluating AMR in the complex lung microenvironment, failing to account for adaptive mechanisms like biofilm formation.
- Antibiotic dosing in CF is further complicated by modified pharmacokinetics and poor penetration into lung tissue.
Purpose of the Study:
- To review current knowledge on AMR in CF.
- To provide a concise overview of existing therapeutic strategies for CF pulmonary exacerbations.
- To discuss future directions in antimicrobial stewardship for managing AMR in CF.
Main Methods:
- Literature review of existing knowledge on AMR in CF.
- Analysis of conventional and novel diagnostic approaches for AMR evaluation.
- Discussion of current and future therapeutic strategies and antimicrobial stewardship.
Main Results:
- Existing therapeutic strategies are often inadequate for eradicating pathogens and contribute to AMR development.
- Evaluating AMR is challenging due to limitations in conventional methods and pathogen adaptive mechanisms.
- Novel molecular diagnostic tools like metagenomic sequencing are gaining importance.
Conclusions:
- Effective management of AMR in CF requires targeting underlying resistance mechanisms.
- The development of new antibiotics is slow, necessitating urgent strategies for persistent infections.
- Integrated management and monitoring of antibiotic usage are essential for antimicrobial stewardship in CF.
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