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Related Concept Videos

Proteomics01:33

Proteomics

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A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
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Immunoprecipitation01:20

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Immunoprecipitation, or IP, is a widely used technique that employs protein-antibody interactions to isolate proteins or protein complexes in their native state for studying protein-protein interactions, quaternary structures, or supramolecular complexes. Various modifications of the technique, including chromatin IP, cross-linking IP, and fluorescence IP, are commonly used.
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Antibody Actions01:26

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Antibodies, or immunoglobulins, are critical players in the immune system's arsenal against invading pathogens. Produced by B cells and plasma cells, their primary role is to detect and bind to specific antigens, molecules found on the surface of pathogens like bacteria or viruses. Beyond antigen recognition, antibodies perform several vital functions that contribute to immune defense.
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Western Blotting01:15

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Western blotting is an analytical technique for protein identification. It has various applications in immunology and medicine, including detecting diseases like bovine spongiform encephalopathy, mad cow disease, and human and feline immunodeficiency virus from biological samples.
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Antibody Structure01:10

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Overview
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
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Related Experiment Video

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Synthetic Antigen Controls for Immunohistochemistry
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[Antibody proteomics].

L Sh Kazieva1, T E Farafonova1, V G Zgoda1

  • 1Institute of Biomedical Chemistry, Moscow, Russia.

Biomeditsinskaia Khimiia
|March 1, 2023
PubMed
Summary

Studying antibodies is crucial for understanding immunity and developing new medical treatments. Proteomics offers advanced methods to identify antibody structures and modifications, aiding diagnostics and biotechnology.

Area of Science:

  • Immunology
  • Molecular Biology
  • Proteomics

Context:

  • Antibodies are key to humoral immunity, with specific antigen-binding properties vital for diagnostics and therapeutics.
  • The variable regions of antibodies, crucial for specificity, are not well-documented in genomic databases.
  • Traditional proteomic methods face challenges in antibody primary structure identification due to unique, non-encoded sequences.

Purpose:

  • To review proteomic and proteogenomic approaches for antibody research.
  • To highlight methods for identifying antibody primary structure and post-translational modifications.
  • To showcase the application of bioinformatics in decoding antibody information.

Summary:

  • This review explores proteomic and proteogenomic techniques applicable to antibody analysis.
Keywords:
antibodiesantibody repertoirede novo antibody sequencingmass-spectrometry

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  • Methods discussed include de novo sequencing and B cell genome sequencing for identifying unique antibody variable regions.
  • The review emphasizes evaluating post-translational modifications and utilizing bioinformatics for antibody data interpretation.
  • Impact:

    • Provides a methodological overview for researchers studying antibody structure and function.
    • Facilitates advancements in antibody-based diagnostics and therapeutics.
    • Enhances understanding of antibody diversity and its implications in medicine and biotechnology.