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Updated: Aug 8, 2025

Direct Measurement of KDM1A Target Engagement Using Chemoprobe-based Immunoassays
Published on: June 13, 2019
Recent advances of LSD1/KDM1A inhibitors for disease therapy
Chaofeng Zhang1, Zhiyuan Wang1, Yuting Shi1
1School of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.
Abstract:
Lysine-specific demethylase 1 (LSD1/KDM1A) dysregulation is closely associated with the pathological processes of various diseases, especially hematologic malignancies. Significant progresses have been made in the field of LSD1-targeted drug discovery. Nine LSD1 inhibitors including tranylcypromine, ORY-1001, ORY-2001, GSK-2879552, IMG-7289, INCB059872, TAK-418, CC-90011 and SP-2577 have entered clinical stage for disease treatment as either mono- or combinational therapy. This review updates LSD1 inhibitors reported during 2022. Design strategies, structure-activity relationship studies, binding model analysis and modes of action are highlighted. In particular, the unique multiple-copies binding mode of quinazoline derivatives paves new ways for the development of reversible LSD1 inhibitors by blocking the substrate entrance. The design strategy of clinical candidate TAK-418 also provides directions for further optimization of novel irreversible LSD1 inhibitors with low hematological side effects. The influence of the stereochemistry on the potency against LSD1 and its homolog LSD2 is briefly discussed. Finally, the challenges and prospects of LSD1-targeted drug discovery are also given.
Insights
Lysine-specific demethylase 1 (LSD1/KDM1A) inhibitors show promise for treating hematologic malignancies. Recent advancements in 2022 focus on novel design strategies and understanding binding modes for improved therapeutic outcomes.
Area of Science:
- Biochemistry
- Medicinal Chemistry
- Oncology
Background:
- Lysine-specific demethylase 1 (LSD1/KDM1A) is implicated in hematologic malignancies.
- Several LSD1 inhibitors have advanced to clinical trials for cancer treatment.
Purpose of the Study:
- To review LSD1 inhibitors reported in 2022.
- To highlight design strategies, structure-activity relationships, binding models, and mechanisms of action.
- To discuss challenges and future prospects in LSD1-targeted drug discovery.
Main Methods:
- Literature review of LSD1 inhibitors published in 2022.
- Analysis of design strategies, SAR, binding modes, and MoA.
- Discussion of stereochemistry's influence on LSD1/LSD2 inhibition.
Main Results:
- Nine LSD1 inhibitors are in clinical trials.
- Quinazoline derivatives exhibit a unique binding mode for reversible inhibition.
- TAK-418's design offers insights for optimizing irreversible inhibitors with reduced side effects.
Conclusions:
- LSD1 inhibitor development is rapidly advancing.
- Novel design strategies are emerging for both reversible and irreversible inhibitors.
- Further research is needed to overcome challenges and realize the full therapeutic potential of LSD1 inhibitors.
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