Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Chemical and Solubility Equilibria02:21

Chemical and Solubility Equilibria

4.2K
The free energy change associated with dissolving a solute in a liter of solvent is called the free energy of a solution, ΔGsolution. The overall ΔGsolution is expressed as the balance of ΔGinteraction against the always-favorable free-energy of mixing, ΔGmixing. Solution formation is favorable if  ΔGsolution is less than zero, whereas it is unfavorable if ΔGsolution is greater than zero. In short, for a solution to form and complete dissolution to take place,...
4.2K
Entropy and Solvation02:05

Entropy and Solvation

7.1K
The process of surrounding a solute with solvent is called solvation. It involves evenly distributing the solute within the solvent. The rule of thumb for determining a solvent for a given compound is that like dissolves like. A good solvent has molecular characteristics similar to those of the compound to be dissolved. For example, polar solutions dissolve polar solutes, and apolar solvents dissolve apolar solutes. A polar solvent is a solvent that has a high dielectric constant (ϵ...
7.1K
Energetics of Solution Formation02:35

Energetics of Solution Formation

6.8K
The formation of a solution is an example of a spontaneous process, which is a process that occurs under specified conditions without energy from some external source.
When the strengths of the intermolecular forces of attraction between solute and solvent species in a solution are no different than those present in the separated components, the solution is formed with no accompanying energy change. Formation of the solution requires the solute–solute and solvent–solvent...
6.8K
Solvating Effects02:12

Solvating Effects

7.5K
An understanding of the solvating effect helps rationalize the relation between solvation and acidity of the compound. In addition, this also explains the relative stability of conjugate bases for compounds with different pKa values. This lesson details, in-depth, the principle of solvating effects. The strength of an acid and the stability of its corresponding conjugate base are determined using pKa values. This observed relationship is a consequence of solvation, which is the interaction...
7.5K
Enthalpy of Solution02:39

Enthalpy of Solution

25.0K
There are two criteria that favor, but do not guarantee, the spontaneous formation of a solution:
25.0K
Aqueous Solutions and Heats of Hydration02:42

Aqueous Solutions and Heats of Hydration

14.8K
Water and other polar molecules are attracted to ions. The electrostatic attraction between an ion and a molecule with a dipole is called an ion-dipole attraction. These attractions play an important role in the dissolution of ionic compounds in water.
When ionic compounds dissolve in water, the ions in the solid separate and disperse uniformly throughout the solution because water molecules surround and solvate the ions, reducing the strong electrostatic forces between them. This process...
14.8K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Fast sampling of protein conformational dynamics.

Science advances·2026
Same author

High-Throughput Computation of Anharmonic Low-Frequency Protein Vibrations.

The journal of physical chemistry. B·2025
Same author

Exploring Conformational Landscapes Along Anharmonic Low-Frequency Vibrations.

The journal of physical chemistry. B·2024
Same author

Linear and Nonlinear Dielectric Response of Intrinsically Disordered Proteins.

The journal of physical chemistry letters·2024
Same author

Solvation Thermodynamics and Its Applications.

Entropy (Basel, Switzerland)·2024
Same author

Is Time's Asymmetry Related to Irreversible Processes and the Second Law?

Entropy (Basel, Switzerland)·2023

Related Experiment Video

Updated: Aug 8, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.3K

Solvation free energy arithmetic for small organic molecules.

Aleksandar Lazaric1, Viren Pattni1, Kaprao Fuegner1

  • 1School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA.

Journal of Computational Chemistry
|March 3, 2023
PubMed
Summary

Predicting solvation free energies is crucial for drug design. This study introduces solvation free energy arithmetic for additive models, revealing electrostatics as key to nonadditive contributions in benzene derivatives.

Keywords:
computational drug designsolvation thermodynamics

More Related Videos

Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes
09:42

Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes

Published on: January 16, 2016

9.1K
Quantitative Structure-Activity Relationship, Activity Prediction, and Molecular Dynamics of Non-nucleotide Reverse Transcriptase Inhibitors
10:29

Quantitative Structure-Activity Relationship, Activity Prediction, and Molecular Dynamics of Non-nucleotide Reverse Transcriptase Inhibitors

Published on: May 9, 2025

1.4K

Related Experiment Videos

Last Updated: Aug 8, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.3K
Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes
09:42

Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes

Published on: January 16, 2016

9.1K
Quantitative Structure-Activity Relationship, Activity Prediction, and Molecular Dynamics of Non-nucleotide Reverse Transcriptase Inhibitors
10:29

Quantitative Structure-Activity Relationship, Activity Prediction, and Molecular Dynamics of Non-nucleotide Reverse Transcriptase Inhibitors

Published on: May 9, 2025

1.4K

Area of Science:

  • Computational chemistry
  • Physical chemistry
  • Drug design

Background:

  • Solvent-mediated interactions significantly impact ligand binding affinities in computational drug design.
  • Accurate theoretical prediction of these interactions, particularly solvation free energies, remains a challenge.

Purpose of the Study:

  • To analyze solvation free energy contributions for benzene derivatives in water.
  • To develop predictive models for solvation free energies and solvent-mediated interactions.
  • To introduce solvation free energy arithmetic for additive modeling.

Main Methods:

  • Spatially resolved analysis of local solvation free energy contributions.
  • Definition and application of solvation free energy arithmetic.
  • Comparison of substituent effects (carboxyl and nitro-groups) on solvation.
  • Validation using computationally efficient continuum models.

Main Results:

  • Developed additive models for describing the solvation of complex compounds.
  • Identified electrostatics as the primary source of nonadditive solvation free energy contributions.
  • Demonstrated that continuum models can qualitatively reproduce these electrostatic effects.
  • Analyzed distinct water interactions of carboxyl and nitro-groups despite similar sterics.

Conclusions:

  • Solvation free energy arithmetic provides a framework for accurate additive models.
  • Electrostatic interactions are critical for understanding nonadditive solvation effects.
  • Computationally efficient continuum models show promise for predicting solvation in complex molecules.
  • The findings guide the development of improved computational drug design tools.