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A Fluorogenic Peptide Cleavage Assay to Screen for Proteolytic Activity: Applications for coronavirus spike protein activation
Published on: January 9, 2019
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SARS-CoV-2 S Mutations: A Lesson from the Viral World to Understand How Human Furin Works
Leonardo Cassari1, Angela Pavan2, Giulia Zoia2
1Department of Industrial Engineering, University of Padova, Via Marzolo 9, 35131 Padova, Italy.
International Journal of Molecular Sciences
|March 11, 2023
Summary
Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) relies on the protease Furin for maturation and spread. While the virus mutates, it maintains Furin dependence, preventing escape variants.
Area of Science:
- Virology
- Molecular Biology
- Evolutionary Biology
Background:
- Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causes a global pandemic.
- The virus's efficient human-to-human transmission is linked to its unique characteristics.
- Furin, a ubiquitous cellular protease, is crucial for the maturation of the SARS-CoV-2 spike (S) glycoprotein, enabling viral invasion and replication.
Purpose of the Study:
- To investigate the natural variations in the amino acid sequence around the S protein's cleavage site.
- To understand the evolutionary dynamics of SARS-CoV-2's interaction with Furin.
- To identify potential targets for antiviral drug development.
Main Methods:
- Analysis of naturally occurring amino acid variations in the S protein cleavage site.
- Assessment of gain-of-function phenotypes associated with specific mutations.
- Evaluation of synthetic surrogate cleavability.
Main Results:
- SARS-CoV-2 preferentially mutates at P positions, leading to single residue replacements.
- Observed mutations can result in gain-of-function phenotypes under certain conditions.
- Despite some mutations, the polybasic cleavage site and Furin dependence are maintained, with no observed escape variants.
Conclusions:
- SARS-CoV-2 exhibits rapid optimization of its S protein for Furin interaction.
- The virus's dependence on Furin remains consistent, highlighting its evolutionary strategy.
- Findings provide insights for developing drugs targeting Furin and Furin-dependent pathogens.
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