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Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
Vanished MDM2 amplification in multiple recurrences of an irradiated poorly differentiated sarcoma with amplified
Samantha Goffinet1,2,3, Ilaria Di Mauro1,2, Jérôme Doyen4
1Laboratory of Solid Tumor Genetics, Department of Pathology and Molecular Oncology, University Hospital of Nice-Côte d'Azur University, Nice, France.
Abstract:
Among sarcomas, MDM2 amplification is usually a molecular hallmark of well-differentiated liposarcoma and dedifferentiated liposarcoma (DDLPS) and occasionally a secondary genetic anomaly in other sarcomas. Histological evaluation and FISH analysis showing MDM2 amplification led to the diagnosis of DDLPS for a tumor located on the left arm of a 71-year-old patient. The patient was treated by adjuvant radiotherapy (RT) but the tumor recurred soon after. Array-comparative genomic hybridization and targeted RNA/DNA sequencing of the primary tumor and of four recurrences were done. Strikingly, the MDM2 amplification observed in the primary tumor had vanished in the recurrences. In contrast, other rearrangements, such as amplification of the genes TRIO and TERT as well as TRIO::TERT fusion were detected retrospectively in the primary tumor and in all the recurrences. The transitory nature of the MDM2 amplification raised the hypothesis that RT was active on cells that contained MDM2 amplification but not on other tumor cells with only the TERT and TRIO alterations. In contrast to MDM2 amplification, the TRIO::TERT amplified fusion was stable over time. The detection of this fusion was crucial in the analysis of the diagnostically challenging last tumor; it allowed to determine that it was a fourth recurrence, instead of a new independent tumor. It also suggested the diagnosis undifferentiated pleomorphic sarcoma rather than DDLPS. The TRIO::TERT fusion is not well explored. The current study shows that its role in sarcomas, with or without MDM2 amplification, should be more extensively researched.
Insights
MDM2 amplification, a marker for dedifferentiated liposarcoma (DDLPS), disappeared after radiotherapy. A stable TRIO::TERT fusion emerged, suggesting a new sarcoma subtype and highlighting the need for further research into this fusion.
Area of Science:
- Oncology
- Genetics
- Sarcoma Research
Background:
- MDM2 amplification is a key marker for dedifferentiated liposarcoma (DDLPS).
- Radiotherapy (RT) is a common adjuvant treatment for sarcomas.
Observation:
- A patient diagnosed with DDLPS showed MDM2 amplification in the primary tumor.
- Following RT, MDM2 amplification was lost in tumor recurrences.
- A TRIO::TERT fusion and gene amplifications (TRIO, TERT) were consistently detected in primary and recurrent tumors.
Findings:
- The transitory nature of MDM2 amplification suggests RT selectively targeted MDM2-amplified cells.
- The TRIO::TERT fusion remained stable, aiding in identifying it as a recurrence and suggesting a shift in diagnosis from DDLPS to undifferentiated pleomorphic sarcoma.
- The TRIO::TERT fusion's role in sarcomas warrants further investigation.
Implications:
- This study challenges the diagnostic criteria for DDLPS and suggests alternative classifications based on genetic alterations.
- The TRIO::TERT fusion represents a potential therapeutic target and diagnostic biomarker in sarcomas.
- Further research into the TRIO::TERT fusion is crucial for understanding sarcoma evolution and treatment resistance.
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