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Interactomics in plant defence: progress and opportunities.

Nur Hikmah Mostaffa1, Ahmad Husaini Suhaimi1, Aisyafaznim Al-Idrus2

  • 1Programme of Genetics, Institute of Biological Sciences, Faculty of Science, Universiti Malaya, 50603, Kuala Lumpur, Malaysia.

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Plant interactomics reveals protein interactions crucial for defense. This study outlines a research pipeline for plant-pathogen interactomics, addressing key challenges to advance this field.

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Area of Science:

  • Systems biology
  • Molecular biology
  • Plant pathology

Background:

  • Protein-protein interactions are fundamental to cellular processes and phenotypes.
  • Understanding host-pathogen interactions is key to deciphering plant defense mechanisms.
  • Plant interactomics has advanced, but plant-pathogen interactomics requires further exploration.

Approach:

  • Systematic review of plant interactomics studies over the past two decades.
  • Development of a comprehensive research pipeline for in planta plant-pathogen interactomics.
  • Inclusion of in silico prediction and validation steps, applicable beyond model plants.

Key Points:

  • Plant-pathogen interactomics is an under-explored area within systems biology.
  • A detailed research pipeline is proposed to guide future studies.
  • Four significant challenges in the field are identified with potential solutions.

Conclusions:

  • Systematic reviews show progress in plant interactomics, highlighting the need for more plant-pathogen studies.
  • The proposed pipeline offers a framework for robust in planta plant-pathogen interactomics.
  • Addressing identified challenges will accelerate discoveries in plant defense.