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Updated: Aug 6, 2025

3D Analysis of Multi-cellular Responses to Chemoattractant Gradients
Published on: May 24, 2019
Multi-range ERK responses shape the proliferative trajectory of single cells following oncogene induction
Jia-Yun Chen1, Clemens Hug2, José Reyes3
1Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Department of Systems Biology, Harvard Medical School, Boston, MA 02115, USA.
Abstract:
Oncogene-induced senescence is a phenomenon in which aberrant oncogene expression causes non-transformed cells to enter a non-proliferative state. Cells undergoing oncogenic induction display phenotypic heterogeneity, with some cells senescing and others remaining proliferative. The causes of heterogeneity remain unclear. We studied the sources of heterogeneity in the responses of human epithelial cells to oncogenic BRAFV600E expression. We found that a narrow expression range of BRAFV600E generated a wide range of activities of its downstream effector ERK. In population-level and single-cell assays, ERK activity displayed a non-monotonic relationship to proliferation, with intermediate ERK activities leading to maximal proliferation. We profiled gene expression across a range of ERK activities over time and characterized four distinct ERK response classes, which we propose act in concert to generate the ERK-proliferation response. Altogether, our studies map the input-output relationships between ERK activity and proliferation, elucidating how heterogeneity can be generated during oncogene induction.
Insights
Aberrant oncogene expression causes cell cycle arrest, but responses vary. This study reveals how BRAF-driven ERK signaling heterogeneity dictates proliferation versus senescence in human epithelial cells, clarifying oncogenic induction outcomes.
Area of Science:
- Cell Biology
- Oncology
- Molecular Biology
Background:
- Oncogene-induced senescence (OIS) is a tumor-suppressive mechanism where cells cease proliferation due to oncogene activation.
- Phenotypic heterogeneity is observed in OIS, with some cells senescing while others remain proliferative, but the underlying causes are not fully understood.
- Understanding OIS heterogeneity is crucial for cancer research and therapeutic development.
Purpose of the Study:
- To investigate the sources of heterogeneity in human epithelial cell responses to oncogenic BRAFV600E expression.
- To elucidate the relationship between BRAF-driven ERK signaling activity and cell proliferation/senescence.
- To characterize distinct cellular response classes to oncogenic signaling.
Main Methods:
- Induction of oncogenic BRAFV600E in human epithelial cells.
- Population-level and single-cell assays to measure ERK activity and proliferation.
- Gene expression profiling across a range of ERK activities over time.
Main Results:
- A narrow range of BRAFV600E expression resulted in a broad spectrum of downstream ERK activities.
- ERK activity showed a non-monotonic relationship with proliferation, with intermediate levels promoting maximal proliferation.
- Four distinct ERK response classes were identified, suggesting a coordinated role in generating heterogeneous proliferation outcomes.
Conclusions:
- The study maps the input-output relationship between ERK activity and cell proliferation during oncogene induction.
- Heterogeneity in oncogene-induced senescence arises from variations in downstream signaling dynamics, specifically ERK activity.
- These findings provide a mechanistic framework for understanding cellular responses to oncogenic stress.
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