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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
Published on: December 22, 2014
Assessment of a novel continuous cleaning device using metatranscriptomics in diverse hospital environments
Justin R Wright1, Truc T Ly1, Karen B Cromwell2
1Contamination Source Identification, LLC., Huntingdon, PA, United States.
The cleanSURFACES® technology, combined with routine disinfection, effectively altered microbial communities on high-touch surfaces in hospital settings. This intervention reduced specific pathogens, contributing to infection control strategies.
Area of Science:
- Microbiology
- Environmental Health
- Infection Control
Background:
- Healthcare-associated infections (HAIs) are often transmitted via contaminated surfaces.
- Routine cleaning may not fully eliminate microbial reservoirs on high-touch surfaces.
Purpose of the Study:
- To evaluate the efficacy of cleanSURFACES® technology in reducing microbial burden on high-touch surfaces.
- To assess the impact of cleanSURFACES® on microbial community composition in clinical settings.
Main Methods:
- Analysis of high-touch surface swabs using metatranscriptomic sequencing (CSI-Dx™).
- Study conducted in an Emergency Department and an inpatient Oncology Ward.
- Evaluation of microbial changes at baseline and post-intervention timepoints (Days 1, 7, 14, 28).
Main Results:
- No significant difference in microbial richness observed.
- Significant shifts in microbial community structure (beta diversity) post-intervention.
- Reductions in specific pathogens like coagulase-negative staphylococci and *Malassezia restricta* noted.
Conclusions:
- cleanSURFACES® technology, alongside routine disinfection, impacts microbial community composition on hospital surfaces.
- The technology shows potential for enhancing infection control by limiting microbial re-contamination.
- Findings support the use of cleanSURFACES® in diverse patient care areas.
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