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Updated: Aug 6, 2025

Electroporation-Based CRISPR-Cas9-Mediated Gene Knockout in THP-1 Cells and Single-Cell Clone Isolation
Published on: February 28, 2025
HAP1, a new revolutionary cell model for gene editing using CRISPR-Cas9.
Gemma Llargués-Sistac1, Laia Bonjoch1, Sergi Castellvi-Bel1
1Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Gastroenterology Department, Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBEREHD), Hospital Clínic, Barcelona, Spain.
Human near-haploid HAP1 cells and CRISPR-Cas9 gene editing accelerate the functional study of genetic variants identified by next-generation sequencing (NGS). This approach aids in understanding complex diseases and improving patient care.
Area of Science:
- Genetics
- Genomics
- Cell Biology
Background:
- Next-generation sequencing (NGS) identifies numerous genetic variants in complex diseases like cancer, but their functional significance remains unclear.
- Haploid human cell models, particularly the HAP1 cell line, are crucial for unmasking variant phenotypes due to their single genome copy.
- CRISPR-Cas9 gene editing technology enables efficient modification of the HAP1 genome.
Purpose of the Study:
- To review the application of the HAP1 cell line with CRISPR-Cas9 for functional genetic studies.
- To explore the development of disease models and understanding the genetic basis of human diseases.
- To highlight the potential for interpreting genetic variants and impacting clinical practice.
Main Methods:
- Utilizing the HAP1 near-haploid cell line for genetic studies.
- Employing CRISPR-Cas9 gene editing for high-throughput genetic screens.
- Analyzing functional gene studies and genetic variant interpretation.
Main Results:
- HAP1 cells facilitate the unmasked phenotypic display of genetic variants.
- CRISPR-Cas9 enables efficient gene editing in HAP1 cells for functional analysis.
- This combination aids in creating disease models and understanding gene function.
Conclusions:
- The HAP1 cell line combined with CRISPR-Cas9 is a powerful tool for functional genomics.
- It accelerates the interpretation of genetic variants, including those from NGS.
- This research has significant implications for advancing clinical practice and patient care.
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