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Robust multivariable Mendelian randomization based on constrained maximum likelihood.

Zhaotong Lin1, Haoran Xue1, Wei Pan1

  • 1Division of Biostatistics, University of Minnesota, Minneapolis, MN 55455, USA.

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|March 22, 2023
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Summary
This summary is machine-generated.

Multivariable Mendelian randomization (MVMR) offers robust causal inference from genetic data. A new constrained maximum likelihood method (MVMR-cML) improves accuracy and accounts for pleiotropy, revealing direct links between risk factors like triglycerides and coronary artery disease.

Keywords:
GWAS summary dataIVdirect causal effectinstrumental variablemediation analysispleiotropy

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Area of Science:

  • Epidemiology
  • Genetics
  • Biostatistics

Background:

  • Mendelian randomization (MR) uses genetic variants to infer causality from observational data.
  • Multivariable MR (MVMR) enhances causal inference by accounting for pleiotropy and mediating exposures, surpassing univariable MR (UVMR).
  • Existing MVMR methods lack robust theoretical properties and efficiency assessments.

Purpose of the Study:

  • To develop an efficient and robust MVMR method with strong theoretical foundations.
  • To evaluate the performance of the proposed method against existing MVMR techniques.
  • To apply the method to investigate causal relationships between cardiometabolic risk factors and coronary artery disease (CAD).

Main Methods:

  • Proposed a novel MVMR method based on constrained maximum likelihood (cML), termed MVMR-cML.
  • Conducted extensive simulations to assess method performance and robustness.
  • Applied MVMR-cML to large-scale genome-wide association study (GWAS) summary data for cardiometabolic risk factors and CAD.

Main Results:

  • MVMR-cML demonstrated superior performance compared to existing MVMR methods in simulations.
  • The method effectively addressed genetic pleiotropy and mediating effects.
  • Identified direct causal effects of triglycerides, LDL cholesterol, and systolic blood pressure on CAD.
  • Observed diminished effects for HDL cholesterol, diastolic blood pressure, and body height after accounting for other factors.

Conclusions:

  • MVMR-cML provides a theoretically supported, efficient, and robust approach for MVMR analysis.
  • The method enhances understanding of complex causal pathways in cardiometabolic disease.
  • Confirms direct causal roles for specific lipid fractions and blood pressure in CAD etiology.