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Updated: Aug 6, 2025

Screening for Amyloid Aggregation by Semi-Denaturing Detergent-Agarose Gel Electrophoresis
Published on: July 16, 2008
Synthesis and anti-prion aggregation activity of acylthiosemicarbazide analogues
Dong Hwan Kim1, Jaehyeon Kim1, Hakmin Lee1
1Department of Pharmacy and Institute of Pharmaceutical Science and Technology, Hanyang University ERICA campus, Ansan, Republic of Korea.
Abstract:
Prions are infectious protein particles known to cause prion diseases. The biochemical entity of the pathogen is the misfolded prion protein (PrPSc) that forms insoluble amyloids to impair brain function. PrPSc interacts with the non-pathogenic, cellular prion protein (PrPC) and facilitates conversion into a nascent misfolded isoform. Several small molecules have been reported to inhibit the aggregation of PrPSc but no pharmacological intervention was well established thus far. We, here, report that acylthiosemicarbazides inhibit the prion aggregation. Compounds 7x and 7y showed almost perfect inhibition (EC50 = 5 µM) in prion aggregation formation assay. The activity was further confirmed by atomic force microscopy, semi-denaturing detergent agarose gel electrophoresis and real-time quaking induced conversion assay (EC50 = 0.9 and 2.8 µM, respectively). These compounds also disaggregated pre-existing aggregates in vitro and one of them decreased the level of PrPSc in cultured cells with permanent prion infection, suggesting their potential as a treatment platform. In conclusion, hydroxy-2-naphthoylthiosemicarbazides can be an excellent scaffold for the discovery of anti-prion therapeutics.
Insights
New acylthiosemicarbazide compounds effectively inhibit prion aggregation and disaggregate existing amyloid structures. These findings suggest a promising therapeutic platform for prion diseases.
Area of Science:
- Neuroscience
- Biochemistry
- Pharmacology
Background:
- Prions cause neurodegenerative diseases by forming insoluble protein aggregates (PrPSc).
- Existing small molecules show limited success in inhibiting prion formation.
- Acylthiosemicarbazides are investigated as potential inhibitors of prion aggregation.
Purpose of the Study:
- To evaluate acylthiosemicarbazides as inhibitors of prion aggregation.
- To assess the therapeutic potential of these compounds against prion diseases.
Main Methods:
- Prion aggregation inhibition assay.
- Atomic force microscopy.
- Semi-denaturing agarose gel electrophoresis.
- Real-time quaking induced conversion assay.
- In vitro disaggregation assay.
- Cellular PrPSc level reduction assay.
Main Results:
- Compounds 7x and 7y demonstrated potent inhibition of prion aggregation (EC50 = 5 µM).
- Activity was confirmed by AFM, SDD-AGE, and RT-QuIC (EC50 = 0.9 and 2.8 µM).
- Compounds effectively disaggregated pre-existing PrPSc aggregates in vitro.
- One compound reduced PrPSc levels in infected cell cultures.
Conclusions:
- Acylthiosemicarbazides are effective inhibitors of prion aggregation.
- Hydroxy-2-naphthoylthiosemicarbazides represent a promising scaffold for developing anti-prion therapeutics.
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