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Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
Published on: January 16, 2019
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Genetic diseases: How the noise fits in
1Biomedical Engineering Department, Yale Systems Biology Institute, Yale University, New Haven, CT 06520, USA.
Current Biology : CB
|March 28, 2023
Summary
Genetic mutations causing disease may not always cause symptoms due to incomplete penetrance. Model animal studies reveal this phenomenon is a random, stochastic process, impacting disease understanding and treatment strategies.
Area of Science:
- Genetics
- Molecular Biology
- Disease Mechanisms
Background:
- Many pathogenic mutations exhibit incomplete phenotype penetrance, where individuals with the mutation do not display the expected disease characteristics.
- The underlying mechanisms driving this variable expressivity and reduced penetrance remain largely unknown in human genetics.
Purpose of the Study:
- To investigate the stochastic nature of incomplete phenotype penetrance using model organisms.
- To elucidate the probabilistic factors influencing disease manifestation despite the presence of disease-causing mutations.
Main Methods:
- Utilized established model animal systems to study genetic mutations associated with human diseases.
- Employed quantitative assays to track disease onset and severity in genetically modified populations.
- Analyzed data to determine the probability of phenotype expression versus non-expression.
Main Results:
- Model animal studies demonstrated that the outcome of disease-causing mutations is often stochastic, resembling a random chance event.
- A significant proportion of individuals carrying disease-causing mutations did not develop the associated phenotype, supporting incomplete penetrance.
- The probability of disease manifestation was found to be unpredictable at the individual level.
Conclusions:
- Incomplete phenotype penetrance is a stochastic process, akin to flipping a coin, influencing genetic disease outcomes.
- These findings necessitate a re-evaluation of genetic disease prediction and risk assessment.
- Understanding the randomness of penetrance is crucial for advancing personalized genetic medicine and therapeutic interventions.
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