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Computer-Aided Drug Design and Synthesis of Rhenium Clotrimazole Antimicrobial Agents
Youri Cortat1, Miroslava Nedyalkova1, Kevin Schindler1
1Department of Chemistry, Fribourg University, Chemin Du Musée 9, 1700 Fribourg, Switzerland.
Antibiotics (Basel, Switzerland)
|March 29, 2023
Summary
Novel rhenium(I) complexes show promise as new antimicrobial agents against Staphylococcus aureus. Computer-aided drug design identified promising candidates, offering a cost-effective strategy for antibiotic discovery to combat antimicrobial resistance (AMR).
Area of Science:
- Medicinal Chemistry
- Inorganic Chemistry
- Computational Chemistry
Background:
- Antimicrobial resistance (AMR) is a growing global health threat, necessitating the development of novel antimicrobial agents.
- Inorganic and organometallic complexes offer a largely unexplored resource for novel antibiotic discovery.
Purpose of the Study:
- To design and synthesize novel fac-Re(I) tricarbonyl complexes with potential antimicrobial activity.
- To evaluate the antibacterial efficacy of these complexes against Staphylococcus aureus.
- To explore the potential of computer-aided drug design (CADD) and scaffold-hopping for antibiotic discovery.
Main Methods:
- Utilized computer-aided drug design (CADD) with a scaffold-hopping approach to identify promising rhenium(I) complex candidates.
- Synthesized fac-Re(I) tricarbonyl complexes featuring clotrimazole and modified 2,2'-bipyridine ligands.
- Evaluated the antibacterial activity against methicillin-sensitive and methicillin-resistant S. aureus strains, determining minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC).
- Performed molecular docking studies against a homology model of the S. aureus MurG enzyme.
Main Results:
- The synthesized rhenium(I) complexes exhibited antibacterial activity comparable to the reference compound.
- Minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) values were similar to the scaffold compound.
- Docking scores supported the binding affinity of the complexes to the S. aureus MurG enzyme.
Conclusions:
- The study demonstrates the successful application of scaffold-hopping CADD for the de novo design of novel antimicrobial agents.
- The developed rhenium(I) complexes represent a potential new class of antibiotics.
- This approach offers a more cost- and time-efficient strategy for discovering new antibiotics to combat AMR.

