Analysis of MIR27A (rs11671784) Variant Association with Systemic Lupus Erythematous
Zenat Ahmed Khired1, Shahad W Kattan2, Ahmad Khuzaim Alzahrani3
1Department of Surgery, College of Medicine, Jazan University, Jazan 45142, Saudi Arabia.
The MIR27A rs11671784 variant may influence systemic lupus erythematosus (SLE) risk, showing protective effects in heterozygous forms but increased risk with the G/G genotype. This genetic factor is also linked to specific SLE manifestations and blood cell counts.
Area of Science:
- Genetics
- Immunology
- Molecular Biology
Background:
- MicroRNAs (miRs) play a role in autoimmune diseases like systemic lupus erythematosus (SLE).
- The miR-27a gene (MIR27A) and its variants are implicated in disease susceptibility and phenotype.
- Understanding genetic associations is crucial for unraveling SLE pathogenesis.
Purpose of the Study:
- To investigate the association between the MIR27A rs11671784G/A variant and the risk and severity of SLE.
- To determine the genotype frequencies in SLE patients and healthy controls.
- To explore correlations between the variant and clinical manifestations or laboratory findings in SLE patients.
Main Methods:
- Genotyping of 163 adult SLE patients and matched controls using a TaqMan allelic discrimination assay for the MIR27A rs11671784 variant.
- Logistic regression models were employed to analyze the association with SLE susceptibility and risk.
- Statistical analysis was performed to assess correlations with clinical features and blood cell counts.
Main Results:
- The heterozygote genotype (G/A) was the most common in the study cohort (72%).
- The MIR27A rs11671784 variant demonstrated a protective effect against SLE development in heterozygous, dominant, and overdominant models.
- Conversely, the G/G genotype was linked to increased SLE risk in the recessive model (OR = 17.34).
- The variant was significantly associated with musculoskeletal and mucocutaneous manifestations (p=0.035, p=0.009) and altered platelet and white blood cell counts (p=0.034, p=0.049).
Conclusions:
- The MIR27A rs11671784 variant shows a significant association with SLE susceptibility and risk in the studied population.
- The G/G genotype appears to confer higher risk, while heterozygous forms may be protective.
- Further large-scale, multiethnic studies are recommended to validate these findings and their clinical implications.
More Related Videos
05:53Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
Published on: June 21, 2018
07:26High-resolution Melting PCR for Complement Receptor 1 Length Polymorphism Genotyping: An Innovative Tool for Alzheimer's Disease Gene Susceptibility Assessment
Published on: July 18, 2017
Related Concept Videos
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Single Nucleotide Polymorphisms-SNPs
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
